Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0031 |
Symbol | cysS |
ID | 4909679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 24812 |
End bp | 26233 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640123784 |
Product | cysteinyl-tRNA synthetase |
Protein accession | YP_001054937 |
Protein GI | 126458659 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0215] Cysteinyl-tRNA synthetase |
TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCATCT ACAATACGGC GACTAGGCAG GTGGAGGAGT TTACGACTTA TACGCCGGGC CTTGCCAGAG GCTATGTCTG TGGCATTACT CCATATGACC ACGTCCACGT GGGGCATGGG AGAGTGTATG TCTTCTTTGA CATGTTTAGG CGGTACCTCG AGTCTTTGGG GTACGAGGTC CGCCTCGTGG TAAATTTCAC GGACATAGAT GACAAGATCA TCGCAAAGGC TAGGGAGGAG TTTGGCCCTG AGGCTTATAA AAGGTGGAGG GAGGTGCCTG AGCGGTACAT CGCGGAGTTC TTCGAGGTGT CTAAGCGCCT TTTCATAAAG CCCGCCTACG CCTACCCCAG AGTCACGGAG AACGTAGACG ACATGGTGAA GTGGATATCT GCGCTAGTGG AGAAGGGCTT TGCCTACGTG GCCCCAGACG GCTCTGTCTA CTTCGAGGTG GGGAAGGTGC CCAACTACGG GGTTCTCTCT AGGCAGAGGA TAGAGGAGCT GATTGCAGGC GCGAGAGTCG AGCCTGAGCC TGGGAAGAGG AACCCCCTCG ACTTCGCCTT GTGGAAGAGC TGGAGTCCGG GGGAGCCTTG GTGGAATTCG CCTTGGTGCC CCGGGAGGCC TGGGTGGCAC CTCGAGTGCG TGGTGATGTC CACTAAGCAC TTGGGCGTCC CCTTCGACTT CCACGGGGGC GGCGCCGACC TCATCTTCCC CCACCACGAG AACGAGATCG CCATTGCAAA GGCCTACTTT GGGGTAGACA ACTTTGCCAA ATATTGGATA CACGTGGGGT ATCTCACCGT TAGGGGGGAG AAGATGTCGA AGTCCCTCGG CAATGTGATT ACACTTAGGG AGGTGTTGTC TAAGTACAGC GGGGAGGCCC TCCGCCTGGC CTACGCCATG AGCCACTACA GGAAGCCCAT GGAGTTTAGC TTCGAGCTCC TCGACCAGGC GGAGGACATA GTCAAGACTT TATACACTGC GTATGACGAG CTGAGCCAGG CGGTGGCCGA TGCGGGAGAC GCCGACAGAG AGCGGGTGGA CATCGGCAAC TTCAAGGCGG CGTTTTACAG CGCCTTGGAG GACGACTTCT CTACCCCAGA GGCGGTGCAA CAGCTCTACG CTGCGGCTAA GTACATCATA TCCACGGTGT TACACAAGGT GGACAAGTTG TCGAAGAACA CCGTGCTGGC CATCCTCGCC GACTATGTGA AAATGGCCGA CGTAATAGGC GTGCTTGAGA GGAGGGAGGT GGCTAAGGAG GTGGAGGAGG CGGTGAAGGC CCTTGTAGAA GTGCGGGCCA GGTTGCGTAG CGAGAGGCTT TACCAACTGG CCGACTACGT GAGAGAGCGG GCCAAGGCGC TGGGGGCGGA GCTCCACGAC TTTGGCCCAA GGACGTATTA CACCATTCGC CGCCGGGGCT AA
|
Protein sequence | MRIYNTATRQ VEEFTTYTPG LARGYVCGIT PYDHVHVGHG RVYVFFDMFR RYLESLGYEV RLVVNFTDID DKIIAKAREE FGPEAYKRWR EVPERYIAEF FEVSKRLFIK PAYAYPRVTE NVDDMVKWIS ALVEKGFAYV APDGSVYFEV GKVPNYGVLS RQRIEELIAG ARVEPEPGKR NPLDFALWKS WSPGEPWWNS PWCPGRPGWH LECVVMSTKH LGVPFDFHGG GADLIFPHHE NEIAIAKAYF GVDNFAKYWI HVGYLTVRGE KMSKSLGNVI TLREVLSKYS GEALRLAYAM SHYRKPMEFS FELLDQAEDI VKTLYTAYDE LSQAVADAGD ADRERVDIGN FKAAFYSALE DDFSTPEAVQ QLYAAAKYII STVLHKVDKL SKNTVLAILA DYVKMADVIG VLERREVAKE VEEAVKALVE VRARLRSERL YQLADYVRER AKALGAELHD FGPRTYYTIR RRG
|
| |