Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0028 |
Symbol | |
ID | 4909872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 20428 |
End bp | 21273 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640123781 |
Product | hypothetical protein |
Protein accession | YP_001054934 |
Protein GI | 126458656 |
COG category | [R] General function prediction only |
COG ID | [COG1355] Predicted dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATTA GAAAGCCCGC CGTAGCCGGT TACTTCTACG AGTCGAGGGC CGACGAGTTG CAGGCGCGGA TTGAGTGGTC TATTAAACAC GAGATTGGGC CCAAGGCCCC CGTCTTGCCT AAACTCGGGA CCGAGGCCCT AGGCGGCGTG GTTCCACACG CCGGATATAT GTACTCAGGG CCTGTGGCCG CGTGGCTGTA CTCGGCCCTG GCAGGTTACG GCGCGCCCAC AACCTTCGTT ATCATTGGCC CAAACCACTA CGGCATAGGC GCCCCCGTGG CAATTATGAA GTCTGGGGCT TGGGAAACCC CCTTCGGCCG TGTGGAGATA GACGAAGAGC TCGCCTCGCT GATAGCGTCG AACTATAGGG AGATTGAAGA CGATGCCCAC GCCTTTTCTA AGGAGCACTC AATCGAGGTA CAGTTGCCGT TTATCCAGTA CTACTTCAAA AACGTCAAGT TTGTGCCCAT AGCGGTGTGG AGACAGACGC TGTCTACGTC GCGCGAGTTG GGAAAGGCAA TTGCCAAAGC CCTGAGAGAG TACAAGAGGC GAGTGTACTT ATTGGCGAGT AGCGACTTCA ACCACTACGA GCCCCACGAC GTCACCGTTA AAAAAGACGA CATGGCGATA GGCAAAATCT TGGAGTTAGA CGAGGCTGGG CTCTTCGATG TGGCGTCTAG ATTCGACATA TCGATATGTG GAATAGGGCC CATAGCGTCG GTGATAGTTG CGGCGAAAGA GCTGGGGTTC TCCAACGCGG CCTTGCTCAA GCATGCGACT TCTGGCGACA CGAGCGGCTA TCGCGATGAG ACGGTTGGCT ACGCCTCAAT CCTCTTCTAT AAATAA
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Protein sequence | MRIRKPAVAG YFYESRADEL QARIEWSIKH EIGPKAPVLP KLGTEALGGV VPHAGYMYSG PVAAWLYSAL AGYGAPTTFV IIGPNHYGIG APVAIMKSGA WETPFGRVEI DEELASLIAS NYREIEDDAH AFSKEHSIEV QLPFIQYYFK NVKFVPIAVW RQTLSTSREL GKAIAKALRE YKRRVYLLAS SDFNHYEPHD VTVKKDDMAI GKILELDEAG LFDVASRFDI SICGIGPIAS VIVAAKELGF SNAALLKHAT SGDTSGYRDE TVGYASILFY K
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