Gene Pcal_0027 details

Gene Information

• Locus tag: Pcal_0027
• Symbol: rps2P
• ID: 4909505
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 19769
• End bp: 20395
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640123780
• Product: 30S ribosomal protein S2
• Protein accession: YP_001054933
• Protein GI: 126458655
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0052] Ribosomal protein S2
• TIGRFAM ID: [TIGR01012] ribosomal protein Sa(cytosolic)/S2(archaeal)

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 38
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCGAGG AGGCGCAGTA TGAGTATCTC GTGCCGCTGG AGAAATACTT AAGCGCAGGC 
GTGAGATTGG GAACGCGGCT CTCCAATAAG TACCTAGAGG AGAGGGGCTT CATATACGCG 
GTTAGGCCAG ACGGTTTGAG GATCTTCGAC ATTAAGAAAA TCGACGAGCG GCTGAGAATT 
GCGGCCAAAC TCATCGCGAG GTATCCGCCC GACAGAGTGT TAGTACATAC CACAAGGCCC 
TACGGCTTCA AGCCAGTGCA AATGTTCTGC AAATTTGTCG GATGCAAAGC TCTCACAGGC 
AGATTTATAC CAGGCATGTT GACTAACCCC AATCTCTCAA ACTACCTTGA GGTAGACTTG 
CTATTCGTAG TAGACCCGAG ACTAGACTCC CAAGCCGTCG CCGAGGCGGC CAAGATGGGG 
ATACCCGTGG TGGCGCTTGT AGATACAGAC ACGCCGCATC AATACATCGA CTTCATGATC 
CCCTGCAACA ACAAGGGGAG GAAGAGCCTG GCGCTCATCT TCTGGGTTTT GGCTAGGCAG 
GTTCTTAGAG AGAGAGGCGA GCTTAAGCCT GACCAAGACC TCCCTGTCCC GCCCGAGGAG 
TTTGAGACGA GACTTGTACA AACTTAA 

 

Protein sequence

MAEEAQYEYL VPLEKYLSAG VRLGTRLSNK YLEERGFIYA VRPDGLRIFD IKKIDERLRI 
AAKLIARYPP DRVLVHTTRP YGFKPVQMFC KFVGCKALTG RFIPGMLTNP NLSNYLEVDL 
LFVVDPRLDS QAVAEAAKMG IPVVALVDTD TPHQYIDFMI PCNNKGRKSL ALIFWVLARQ 
VLRERGELKP DQDLPVPPEE FETRLVQT