Gene Pcal_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0026 
Symbol 
ID4909053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp19286 
End bp19735 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content56% 
IMG OID640123779 
ProductFHA domain-containing protein 
Protein accessionYP_001054932 
Protein GI126458654 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCTGGA GATGTCCCAT CTGCGGCACT GAGAACCGCG ACGACGCGTT GACATGTAGA 
GTGTGCGGAG CCTATAAGCC CGAGGCAACT ACAAAGAGGA TGGGCCAGCC GCCGAGGGAG
GAGGTCAGCG GCGTAGTTGT AATAGAGGTG TTGGAAAGCC CCGTGGAGCC CCTCGTGGGG
AAAAAGTTTG AGTTTAGAGT CAACTCGCCC GGCACGATTA TCACCGTGGG GAGGTCTGTG
GAAAACCAAG TGGTGGTGCC AGACCCCCTG GTCTCGAGAA GACACTTAAG GCTCATAGTG
ACGCAGAACG GCATAGTAGT AGAGGACTTG GGCAGCAGCA ACGGCACATA TCTATTGACG
GAGGGGGGAG AGCGGCTAGT AAAGGTGGAG AACGTTGGAA AAAGCGCCGT GTTACGCATA
GGGAGGACCA AGCTTAGAAT CGTTGCTTGA
 
Protein sequence
MPWRCPICGT ENRDDALTCR VCGAYKPEAT TKRMGQPPRE EVSGVVVIEV LESPVEPLVG 
KKFEFRVNSP GTIITVGRSV ENQVVVPDPL VSRRHLRLIV TQNGIVVEDL GSSNGTYLLT
EGGERLVKVE NVGKSAVLRI GRTKLRIVA