Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0010 |
Symbol | |
ID | 4909029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 5845 |
End bp | 6618 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640123763 |
Product | putative circadian clock protein, KaiC |
Protein accession | YP_001054916 |
Protein GI | 126458638 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAGGGC ACTTATACTA TGAGACAGTG CCCACAGGCA TAGAGGGTCT TGACACAGTG CTCGGAGGGG GGTTTATCAG GGGGAGGACA TACCTCATAT CTGGCGAAAC AGGTACTGCA AAGACTTTGA CCGCGCTTAC GTTTTTAATA CAAGGCGCCC TTAAATATGG GGAACCCGGC ATATACATCT CCGTAGATGA GACATATGAA CAATTTGTAG AAGGCGCGAG GAGATTTGGC TGGGATATAG AGGAGCTTAG GGCCAAGGGC CTCTTGGAGG TGCTTGTGCC AGAGATGGAC ATTGTAGAGA GAATTAGAGA AAAGGACCCC ACGGCAATTG CGAAATCGCT TGTGGCCTCG ATACGGGACT ATGTGGCGGC ATTGGGGGCT CAGCGGCTGG TCATAGACCC AATAGCTCCT CTGGTTTCGC TTGACAAAGA CGTGCAAGTG CTTAGGGAGT ATATCAGGGT GCTGGTGATG AGCATAGAGA GGGAGATAGC GACTACTAAC ATCATAACTA CCGAGATTCC CTCCGGCTCA GGAGCCATCA GTAGATATGG CGTAGAGGAG TTCTTAGCCA CGGGGGTATT CATCATGGGC ATAGCTAAGA CGCGAGATGG AGCCTTTAAA CGTGTCATGT TTATTAGAAA AATGCGCTGG AGCCCCGTAC ATCCGGGGAT TTATGAGGTA GAAATAGTGC CGAAGGTAGG GGTGGTTGTC AAAGGCCAAG TCCGAGAGCC CATGGTACCT GTGACGTATT TACCGACTAT TTGA
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Protein sequence | MEGHLYYETV PTGIEGLDTV LGGGFIRGRT YLISGETGTA KTLTALTFLI QGALKYGEPG IYISVDETYE QFVEGARRFG WDIEELRAKG LLEVLVPEMD IVERIREKDP TAIAKSLVAS IRDYVAALGA QRLVIDPIAP LVSLDKDVQV LREYIRVLVM SIEREIATTN IITTEIPSGS GAISRYGVEE FLATGVFIMG IAKTRDGAFK RVMFIRKMRW SPVHPGIYEV EIVPKVGVVV KGQVREPMVP VTYLPTI
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