Gene Pcal_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0009 
Symbol 
ID4910053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp5329 
End bp5727 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content48% 
IMG OID640123762 
Producthypothetical protein 
Protein accessionYP_001054915 
Protein GI126458637 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGAGG AGCTCTCTCT TTATATTAGA AAGGGCGGTT TAGTAATAAA GAAGGAGATC 
ATCAAGAGTG GGGGCAAAGT GGCTGGAGAA TATCTATACG TTAGGCATGG GCTATTCGAG
GCTGAGGCTG AGTACGACGT AGAGGACGGC GTATTGTACT ACCTGCAGAT ATGTTGGTTT
AAGCGGTGTT TTATATGGTA CGATGGAGAG CCAGACGCAG CTCCCCCCAT GCAACTGTTG
AAGAAGACAA TCGCCGTGTT TAAAGAGCTA TCTGGGTTTT CCAATGTGGC GGCCGTCGTG
GTTAAAACCA TCGCCTCATA TATCCGCCGA TCTTCACGAC TCAGATCCTC TGACCCCGCT
CATCTAGGCT CATGTGGTGC CGGCTTTAAA AAGATATAA
 
Protein sequence
MAEELSLYIR KGGLVIKKEI IKSGGKVAGE YLYVRHGLFE AEAEYDVEDG VLYYLQICWF 
KRCFIWYDGE PDAAPPMQLL KKTIAVFKEL SGFSNVAAVV VKTIASYIRR SSRLRSSDPA
HLGSCGAGFK KI