| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0005 |
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| Symbol | rfc |
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| ID | 4910102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 3095 |
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| End bp | 4075 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640123758 |
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| Product | replication factor C small subunit |
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| Protein accession | YP_001054911 |
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| Protein GI | 126458633 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGC TTTTTTGGTT TGAGAAGTAT AGGCCGCGTA GTTTTGAGGA GGTGGTGGAT
CTTGAGGAGG TTAAGGCTAG GCTTAGGGAG TTTGTCAAGG CGGGGAATTT GCCGCATCTC
CTCTTCTACG GGCCTCCTGG CACTGGGAAG ACGACGATGG CCCTGGTCTT GGCGAGAGAG
CTGTATGGGG AGTACTGGCG TGAGAACACC CTCGAGCTAA ACGCCTCAGA CGAGAGAGGA
ATCGGAGTAA TAAGAGAGCG AGTAAAAGAG TTCGCCAGAA CGGCGCCCGT GGGAAAGGCC
CCCTTCAAAC TCGTAATACT CGACGAAGCA GACAACATGA CCTCAGACGC CCAACAAGCA
CTACGCAGAA TAATGGAAAT ATACGCACAA AACACCAGAT TCATACTACT AGCAAACTAC
GTAAGCAGGA TCATTGACCC AATTATTTCA CGTTGCGCCG TCTTCCGCTT TTCTCCCATG
CCGCGCCACT TAATGGCAGA GAGGTTACGG GAAATTGCGA GGTCCGAGGG CGTTGAGCTT
AAGGACGACG CCATAGACCT AATCTACGAG ATCTCTGAGG GGGATATGAG GAAGGCTATA
AACCTGCTTC AAGTCGCCGC GGCTGTAAGT AAGGTGGTTG ACGCAAACGC GGTGGCCTCT
GCGGCCGCGG CTGTTAGACC CTCTGATGTG CTTGAGCTGT TTAACTTGGC CATGGGCGGC
GATTTGGCTA AGGCGCGGGA TAAGTTGAGA GAGCTTATGT ACATAAAAGG CGTAGCTGGC
GTCGACTTAA TAAGGGTATT TCAGAGAGAG TTAATAAGGA TGCAACTAGA CGACGACGTT
AAGGCCGAGG TTGCCGAGTT GCTATCTGAA GTAGATTATA GATTGACGCA GGGTGCCGAT
GAAGAAATTC AATTGATGTA CTTTCTCATG AAACTTGGAT CCATTGGCAA AAAGATAAGG
GTTGCGCCAA AGAAGAGATA A
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| Protein sequence | MSELFWFEKY RPRSFEEVVD LEEVKARLRE FVKAGNLPHL LFYGPPGTGK TTMALVLARE
LYGEYWRENT LELNASDERG IGVIRERVKE FARTAPVGKA PFKLVILDEA DNMTSDAQQA
LRRIMEIYAQ NTRFILLANY VSRIIDPIIS RCAVFRFSPM PRHLMAERLR EIARSEGVEL
KDDAIDLIYE ISEGDMRKAI NLLQVAAAVS KVVDANAVAS AAAAVRPSDV LELFNLAMGG
DLAKARDKLR ELMYIKGVAG VDLIRVFQRE LIRMQLDDDV KAEVAELLSE VDYRLTQGAD
EEIQLMYFLM KLGSIGKKIR VAPKKR
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