Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0002 |
Symbol | cdc6 |
ID | 4908934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 379 |
End bp | 1551 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640123755 |
Product | cell division control protein 6 |
Protein accession | YP_001054908 |
Protein GI | 126458630 |
COG category | [L] Replication, recombination and repair [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1474] Cdc6-related protein, AAA superfamily ATPase |
TIGRFAM ID | [TIGR02928] orc1/cdc6 family replication initiation protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACATGG TCATAATTGA TGAGGCAGTC TTCTCCCCCA GCTATGTCCC AGAGAGACTT CCGCACAGAG AAGAACAGAT CCAGCAACTA GACGCCTTGT TCGGTGGGTG GCTCCGTAAT CCTGGCCGTC ACTATCCGCG TGTGGTACTT CTAGGAAGAC CAGGCACAGG CAAAACTGCC ACATTACGTA GATTTTGGTC TACTATAAAA AATGAGACAA ATGTAAAATT TGTTCATATA AACTGCTTTA TATATAGAAA TTTTAGCACT ATTATAGGAG AAATTGCAAA GTCGTTAAAT ATCCCGTTTC CGAGGAGGGG TCTCAGTAAA GACGAATTTC TCTCACTACT CATAGAACAT CTACGCGAGA GAGACCTCTA CATATTCCTG GCATTGGATG ATGCCTTTAA TCTCTCCGCA GACGTCTTGT CGACATTTAT AAGACTAGGC CAAGAGTCCG ACAGGCTTGG CGCATTTAGA ATTGCGCTGG CAGTTGTTGG CCACAGCGAC AGTATGATCA ATAACTTAGA CCCTTCAACG CGTGGGATTA TGGGCAAGTT TGTAATACGC TTTCCTCCCT ACACCAGGGA CCAGATATTT GACATAATAC TGGAGAGGGC GCAGATGGGG CTTGCCCCTG GCGCTTACAG CGACGAGGTT CTACAAATGA TAGCAGACTT AACTGGCGCA CAAAGCCCCC TAGACTCAAG CAAGGGGGAT GCGAGACTTG CCATAGATAT ACTATACCGC TCGGCATATA TCGCCCAGCA ATCTGGGAGA AGGCAAATAA CGCCTGAGGA CGTCAGGAGG GCAACCAAGG AGGTTCTCTT TGGAGTCTCG GAGGAGGTGC TTAGAGGTCT TTCTCTACAT GAGAAGTTGT TCCTACTGGC GATAGTAAGA GCTTTGAAAA GCACAAACAG CCCGTATGTT ACCTTTGGCG ATGTTGAAGA TATGTATAAG ATGATATGTG AAGAATTTGA TGAGAAGCCG AGAGTGCATA CACAGCTATG GACATATCTA AGCGATTTGA GAGATAAGGG GATCGTAGAG ACGCGGTTAA ACAAAAGAGG GGAGGGGGTG CGGGGGCGTA CTACTCTTAT CTCCATAGGA TCGGAACCCC TGGATACGTT AGAGGCCGTT GTTACGAAGC TTATTAGAGA GGAGCTACAA TGA
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Protein sequence | MHMVIIDEAV FSPSYVPERL PHREEQIQQL DALFGGWLRN PGRHYPRVVL LGRPGTGKTA TLRRFWSTIK NETNVKFVHI NCFIYRNFST IIGEIAKSLN IPFPRRGLSK DEFLSLLIEH LRERDLYIFL ALDDAFNLSA DVLSTFIRLG QESDRLGAFR IALAVVGHSD SMINNLDPST RGIMGKFVIR FPPYTRDQIF DIILERAQMG LAPGAYSDEV LQMIADLTGA QSPLDSSKGD ARLAIDILYR SAYIAQQSGR RQITPEDVRR ATKEVLFGVS EEVLRGLSLH EKLFLLAIVR ALKSTNSPYV TFGDVEDMYK MICEEFDEKP RVHTQLWTYL SDLRDKGIVE TRLNKRGEGV RGRTTLISIG SEPLDTLEAV VTKLIREELQ
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