| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_87011 |
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| Symbol | SOD4.2 |
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| ID | 4851641 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2423508 |
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| End bp | 2424525 |
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| Gene Length | 1018 bp |
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| Protein Length | 296 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640393349 |
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| Product | Mn-superoxide dismutase |
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| Protein accession | XP_001387038 |
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| Protein GI | 126275128 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0605] Superoxide dismutase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.352684 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AACAAGCCAG ATGGATTCAC AGGATTGTTT TCTTCGTCGA CTGTGAGTGA GTTGTGGTTC
AAAAGGGGAC AAGACCTCAC AGAGGGCCTA AACCAGTCAC TTGAGCAGTC ATACTCCTCC
ACTGATTCCG AGGGCGTTTC TTCGTCTGAG TCCAACAACT TACAGGATAT CATTTCTCAA
TCCATTCACA AACCAGAGCT CTATGGAATC TATTGTTATG CTTCTTATTT ATACAACTTA
CAATTCTTCT TGGAGAGCTT GAAAGAGGGA TCTGTTTCTC AAGTCGTTCA ACATGGTAAG
CCTGAAGATT TGTTGAAGAC TCCTACTGCT GAGTTTGGTA ATGAACCTAA AGATGATAAG
CTCAGGGAGT GGATCATTGA TTCGTTTGGT TCAGTAGTTG AGTTCAGAGC GTTGTTTCTC
AACTCTGCCA ACGCTATTAA GGGTGATGGT GTTGTGTGGT TAGTTGCTGA ATCAAACTTG
AGTCAAAGCG TATTAAAGAA TAGTCCCAGT GTCACTGAGC CAGGCCAAAC CAAGAGGCCC
ATTTTCAACA AACTTTCAGT AGTTAATACA TATAATGCTG GTGTAGTTGA TGACTCGATC
AGATCTGGCC AGATACAGCG CTTGAAACAG CAAAAAGAAG CCAAGATCGC TGCCTTGAAA
AGTAAGCAGC TTGAGAGAGA TTCTATTGAA GGCTCTGATT CGATTGCTTC TGAGATTGAA
GAGTTGCAAA TACAAGTTGA CGAATTATCT TTGGGTACTC TAGAAGATGC CGAGTTTAAC
AACTTGTACA CTGACAAGAA ATTGTTGCCC ATTTTGGCAC TTGATGCATC TCCAAGAAAC
TACTTGTTGG ACTATGGTGT GTTTGGCAAG CAACAGTACT TGGATAATGT TTGGGAATGT
ATTGACTGGG ACGTTGTATC CAGAAGATTG CCTGACAGAA CAAAACAGTT TATCAACACA
TTTTAAATAT AGAACTCTCT CGTTGTAAAT AGTCTACGAA TACATGCTCC AGTATGTG
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| Protein sequence | NKPDGFTGLF SSSTVSELWF KRGQDLTEGL NQSLEQSYSS TDSEGVSSSE SNNLQDIISQ
SIHKPELYGI YCYASYLYNL QFFLESLKEG SVSQVVQHGK PEDLLKTPTA EFGNEPKDDK
LREWIIDSFG SVVEFRALFL NSANAIKGDG VVWLVAESNL SQSVLKNSPS VTEPGQTKRP
IFNKLSVVNT YNAGVVDDSI RSGQIQRLKQ QKEAKIAALK IDELSLGTLE DAEFNNLYTD
KKLLPILALD ASPRNYLLDY GVFGKQQYLD NVWECIDWDV VSRRLPDRTK QFINTF
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