| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_86847 |
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| Symbol | PPA1 |
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| ID | 4851857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 3023002 |
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| End bp | 3023944 |
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| Gene Length | 943 bp |
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| Protein Length | 196 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640393565 |
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| Product | vacuolar ATPase V0 domain subunit c |
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| Protein accession | XP_001386908 |
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| Protein GI | 126275804 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01100] vacuolar ATP synthase 16 kDa proteolipid subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATTGCGTTGT CTTGTGCTCC TCTGTCTGTA CTCACATAAA TATGGCCTAT GCATCCAGTC
TAGTTGCGCT TTCTGTGCTC ACAGTCGGTG GGTATATGCT TTTCACCGGT TCTGGAGAAT
CGTTCAACGT TGGTGAATTC TTGGAGTCCA CCTCGCCTTA CATGTGGGCC TGTCTTGGAA
TTGCCAGTTG TATCGGCTTT TCAGTTGTTG GTGCTGCCTG GGGGATCTTC ATCACTGGCT
CCACCATCTT GGGTGCTGGT GTCAAGGCTC CTCGTATCAC CACTAAGAAT TTAATCTCCA
TCATTTTCTG CGAAGTTGTT GCTATCTATG GTCTTATTAT GGCCATTGTG TTTTCGTCAA
AATTGACTTC AGTCCCTACT TCTGATCTTT TCACAAAGGA AAACTTATAC ACGGGCTATT
CGTTGTTTTG GGCCGGCATC ACTGTTGGTT TGTCCAACTT GATCTGTGGT CTTGCTGTTG
GTGTCACTGG CTCTACTGCT GCCATCTCTG ATGCTGCTGA CTCGTCTCTT TTCGTCAAAA
TCTTGGTGAT TGAGATTTTT GGCTCTGTCT TGGGTTTGTT TGGCTTGATT GTCGGCTTGT
TGATGGCCGG TAAAGCCCAA GAGTTCAAGT AGACTCAATT GATCGCTTTA CAAAGTTGAC
AAGTTGACTT TACTAAACTC TTCACTATAC ATAAAAAAAG TTTAGCATCG ACCAGTTCTA
TTCTCATTTG GAAATGAACG ATGGAACTGC CTTCACTTCT AGCGGCAACA TGCAACCATA
GTTACCATTA TCATGATTTT TGTTCATGTT TTAATATAGT TATCCTTCAA TATAGACCTT
ACGAATTACT TTGTAGACCT AACACTATTG GTACTTCCTG GAAACTAATA AGGTTTATAG
TTATCATTGT ATTTGAACCA AAATCATAGT ATTCTTACTT TGT
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| Protein sequence | MAYASSLVAL SVLTVGGYML FTGSGESFNV GEFLESTSPY MWACLGIASC IGFSVVGAAW
GIFITGSTIL GAGVKAPRIT TKNLISIIFC EVVAIYGLIM AIVFSSKLTS VPTSDLFTKE
NLYTGYSLFW AGITVGLSNL ICGLAVGVTG STAAISDAAD SSLFVKILVI EIFGSVLGLF
GLIVGLLMAG KAQEFK
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