Gene PICST_86838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_86838 
Symbol 
ID4851914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp3166166 
End bp3167216 
Gene Length1051 bp 
Protein Length274 aa 
Translation table 
GC content41% 
IMG OID640393622 
Productpredicted protein 
Protein accessionXP_001387176 
Protein GI126276006 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CAAGCTTGAA TTACACCTTA CATTGCCATA ATAGAGATCT GGCTTTTTGT GGAACTTGCA 
GGCAGTGAAA TCAAGTGAAA TCTGCACATT TCCACCCACA ACCAGTACAA TTGCAGAGAC
TTGAACAACA ACATTAAACC CAATTAGCCT GAAACAAATT TCAATTAATT TGCAATTTCA
CAATGTCATG GAACGGACTA AAGAAAGCCA TCAACAGGGC GGGAGCCCAG GTGATGTTGA
AGACTGGTCA GATAGAGCTG AGTACAGATA AAGAGTTTGA ATTTGAAGAG CATAGGTATA
GAGCCATGGA AACGACGTCT ACAAAGCTCC AGCGTGAACT AAAGCACTAC ATGGAGTCAT
TGCGGTTGCT CAGTAATGCA CAGATTAATG TGGGAGAATC ACTCAGCTCT TTCTACGGAG
CTTCACCCAG TCTGGAACTT GGAGCCGATA AGAGCACCGT TAAGCACAGC GAGTTGTCGC
AGTTGTATTA TGATGTCGTA AAGGACTTAA GTGAGAAGTG TTTCACTGAT GTAGAAACAC
CGTATAACCA GACAGTGTTA AACCCGGTGT CAAGGTTCAA TTCGTACTAT GTAGAAGTCA
ACGAGGCTAT AAAGAAGCGA GCAAGAAAAC AGATCGATTA CGATGCCTTG AAGAGTAAAG
TCAAGAAGCT TATAGAAAAA CCAAACTCAA GTGATGCTGA ATATGAAACC AAACTAGCTT
CAGCGCAATC AGACTTACAG GAGCTGGAAA AAACGTATTT GGCTTTGAAT GATCAATTGA
AGGATGAGTT GCCCAAACTA GTCAATCTTC GGATTCCGTT CCTAGACCCA CTGTTTGAGG
CATTCGTCAA GATCCAGTTG AGGTTCTTCA CTGAAAGCTA CGAGGAGTTA AACAATTTAC
AAATGAAACT TGATGCAAAG ACAAGAGAGG ATTATATAAA CGGAAAGTTG GACAAGAAAG
TGGATGATGT GTTGGTCAAA ATGAAGGAAC TCAACATCAC AGGGTAATGA CTATATGATA
GTGTAGATGA ATAGAAAAAT TAGAATTTTG T
 
Protein sequence
MSWNGLKKAI NRAGAQVMLK TGQIELSTDK EFEFEEHRYR AMETTSTKLQ RELKHYMESL 
RLLSNAQINV GESLSSFYGA SPSLELGADK STVKHSELSQ LYYDVVKDLS EKCFTDVETP
YNQTVLNPVS RFNSYYVEVN EAIKKRARKQ IDYDALKSKV KKLIEKPNSS DAEYETKLAS
AQSDLQELEK TYLALNDQLK DELPKLVNLR IPFLDPLFEA FVKIQLRFFT ESYEELNNLQ
MKLDAKTRED YINGKLDKKV DDVLVKMKEL NITG