| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_86797 |
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| Symbol | |
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| ID | 4851651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2455322 |
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| End bp | 2457903 |
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| Gene Length | 2582 bp |
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| Protein Length | 838 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640393359 |
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| Product | predicted protein |
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| Protein accession | XP_001386803 |
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| Protein GI | 126275158 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.128443 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTTATTTACT AGCCCAATAT GTCTCGTTTG ATCGTGAAGG GACTCCCCAA GTATTATACT
GAGGATAAGT TGAGGGAATT TTTTGGAAAG CAGGGCGATG TCACTGATGT CAAATTGATG
AAAAAGAGAA ATGGAGAATC AAGAAGATTT GCGTTTGTAG GTTATAAGTC GTTCGAAGAT
GCAGAAAAGG CGGCCTCATT CTTCAACAAG TCGTTTATAG ACACTGCCAG AATCGATGTG
GAGTTGGCAA AAACCTTTTC TGATCCAAAT GTGCCAATGT CGTTTAAGGA TAGAAAGAGA
CAAAACGAAG AAAGATTGAG AGAACAGGAA GAAAGATTGC TTCAGCAAGA ACAACAGCAG
AAAAAGCGAA GAAAAAATGT GAACACCATC GACGACGAAA TTGCTGCTGA TCCCAAGTTG
AGAGAGTTTA TGGAAGTTAT GAAGCCTTCA CATCAAGTCA AGTCATGGGC AAATGATTCA
ACAGCTGATG GATCAGGTGC TCCTTCGGCT GCTGCACTTG AAGAAGCCTT GGCTAAGCAA
GATAGCGGTA TAAAGGAGGA GCTTAGCCAG AAGTATGAAG TCAAACAGGC ACGTGAGGTC
GAGAGTGACG ACGAATATGA TGACTTTGTA GCCAATAGGA AGCACAGTGA AGACGACGAG
GAAGAAATGA TGAGTTTAGA CAACTTGAAA AAGCCAGAAG CCGAGGCTGA CGTCGAAGAG
ACTGCTGATA TTGCTGCTGA TGAAAATGTC TCGGACTTGG ACTGGTTGAA GTCGAGGCGT
ATCCGTATCA GAGACAACGA AGAAGAAAAA AAGGAAGAAT CCGTGGGAGA AGTAGTTGAG
GAAACGGCTG AATCTGAAGA ACACAGGGCT AGACCTCGGA GACAGGTAGA AATAGAAGAG
TCTTTAGAAG AAGTCACAGC TGCCAAAATT GCAGTTACGG GTCGTTTGTT CATCAGAAAC
ATCTTGTACA CCTCCACAGA AGCAGAGTTC AGAGATCTTT TTGAACAATA TGGACCTCTT
CAGGAAGTAC ATATTGCTGT AGATACTCGA ACCGGAAAGT CCAAAGGGTT TGTGTATGTA
CAATTTGAAA ACAGCTCTGA TGCCGTCCAA GCCTACGAAG CCTTGGATAA GCAGATTTTC
CAGGGCCGTT TATTGCATAT TTTACCGGGA GAGAAGAAAA AAGACCACCG ACTAGACGAG
TTTGACATCA AAAACTTGCC GTTGAAGAAA CAGCGTGAAT TGAAGAAGAA ATCGCAAGCT
TCGAAGAGTC AATTCAGTTG GAACTCGCTT TATATGAACA CAGATGCTGT ATTGGATTCT
GTTGCTGCCA AGATGGGAGT TTCCAAGTCT CAGTTGATAG ATCCACAAAA CTCGTCTTCT
GCTGTTAAGC AAGCATTAGC AGAAGCTCAC GTAATCGGCG ATGTTAGGAA GTATTTCGAA
GACAGAGGTG TAGATTTGAC TACTTTTGAC AGAAAGGAGA GGGACGACAA GGTTATTCTT
GTCAAGAACT TTCCGTATGG AACCACCATT GAGGAAATTG GTGAGATGTT CACGCAATAT
GGTTCTTTGA AGAGAATGTT GATGCCTCCA GCTGGTACGA TTGCTATCGT GGAATTCCGT
GATGCCCCAG CAGCCAGAGC AGCATTTACC AAATTGGCAT ACAGAAGATT CAAGAAGAGT
ATTATATATC TCGAAAAGGG TCCCAAAGAC TTATTCACTC GTGAACCTTC TGTTCATGAA
ACCGTGGACA AACAAGAGCA GATTGAAAAT GCAGTTGAAG TTAAGGTTAC AGCCAGCGAT
GTCTTAGGAG AATCTTCCAA GAATGAACAA GAACAAAACG AAATAGAAGG TCCAACAGTT
TCGATCTTCG TGAAGAACTT AAACTTCGCT ACTACTGCCT TGCAATTAAC TGAACTTTTT
AACCCATTGG CAGGTTTTGT AGTTGCTACT ATTAAAACCA AACCGGATCC GAAGAATTCT
GGTGGTGTGT TGAGTATGGG ATTTGGCTTT GTGGAATTCA GAACTAAAGA ACAAGCCAAC
GCTGCCATTT CGGCCTTGGA CGGACACGTG TTGGAAGGAC ACAAGTTGCA ATTGAAACTT
TCTCATAGAC AAGGTGGTTC ATCGGCAGGA TCCAAGACTA GCAAGTCTGG ATCCAACAAA
ATTATCATCA AGAACTTGCC ATTTGAAGCT ACCAGAAAAG ATATTTTGGA ATTGTTTGGT
GCTTTCGGTC AATTGAAGTC TGTGAGAGTG CCAAAGAAAT TCGACAAATC TGCCAGAGGT
TTTGCCTTCG TGGAATTCAA CTTGTTGAAA GAAGCTGAGA ATGCTATGAA CCAATTGGAA
GGTGTTCACT TGCTCGGTAG AAGATTAGTA ATGCAATACG CTGAACAAGA CTCGGAGTCA
GCAGAAGCAG AAATCGAGAA GATGACCAGC AAAGTGAGAA AGCAAGTTGC TACGCAACAA
TTAGCAGCAA TCAGATTGAC CGGTAAGGGA AAGATCGAGC TTGAAGACAA GAAGGATGAG
TTTGATGAAC TTTAGCATTT GCCATAGGCC TGTATAATAG ATAGAGTATA ACACTTTTAA
GT
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| Protein sequence | MSRLIVKGLP KYYTEDKLRE FFGKQGDVTD VKLMKKRNGE SRRFAFVGYK SFEDAEKAAS
FFNKSFIDTA RIDVELAKTF SDPNVPMSFK DRKRQNEERL REQEERLLQQ EQQQKKRRKN
VNTIDDEIAA DPKLREFMEV MKPSHQVKSW ANDSTADGSG APSAAALEEA LAKQDSGIKE
ELSQKYEVKQ AREVESDDEY DDFVANRKHS EDDEEEMMSL DNLKKPEAEA DVEETADIAA
DENVSDLDWL KSRRIRIRDN EEEKKEESVG EVVEETAESE EHRARPRRQV EIEESLEEVT
AAKIAVTGRL FIRNILYTST EAEFRDLFEQ YGPLQEVHIA VDTRTGKSKG FVYVQFENSS
DAVQAYEALD KQIFQGRLLH ILPGEKKKDH RLDEFDIKNL PLKKQRELKK KSQASKSQFS
WNSLYMNTDA VLDSVAAKMG VSKSQLIDPQ NSSSAVKQAL AEAHVIGDVR KYFEDRGVDL
TTFDRKERDD KVILVKNFPY GTTIEEIGEM FTQYGSLKRM LMPPAGTIAI VEFRDAPAAR
AAFTKLAYRR FKKSIIYLEK GPKDLFTREP SVHETVDKQE QIENAVEVKV TASDVLGESS
KNEQEQNEIE GPTVSIFVKN LNFATTALQL TELFNPLAGF VVATIKTKPD PKNSGGVLSM
GFGFVEFRTK EQANAAISAL DGHVLEGHKL QLKLSHRQGG SSAGSKTSKS GSNKIIIKNL
PFEATRKDIL ELFGAFGQLK SVRVPKKFDK SARGFAFVEF NLLKEAENAM NQLEGVHLLG
RRLVMQYAEQ DSESAEAEIE KMTSKVRKQV ATQQLAAIRL TGKGKIELED KKDEFDEL
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