| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_86762 |
|---|
| Symbol | |
|---|
| ID | 4851726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | - |
|---|
| Start bp | 2669608 |
|---|
| End bp | 2670104 |
|---|
| Gene Length | 497 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | |
|---|
| GC content | 43% |
|---|
| IMG OID | 640393434 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001387077 |
|---|
| Protein GI | 126275406 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2058] Ribosomal protein L12E/L44/L45/RPP1/RPP2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.271252 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TCTGCCATTA GATAGCTTAA AAGTGATTAT TCTAGTTGAA CGTATAAAAT GAAGTACTTA
GCCGCTTACT TGTTGTTGGT CCAAGGTGGT AACGCCTCTC CATCTGCTGC TGACGTTTCT
GCTCTTTTGG AAACCGTCGG TGTCGAAGCT GAAGAATCCA GAGTCGCCTC TTTGTTGGCT
GAATTGGAAG GTAAGGACGT CAACGAATTG ATTGCCCTCG GTAACACCAA GTTGGCCTCT
GTTCCATCCG GTGGTGCTGC TGTTGCCTCC TCTGGTGCTG CTGCCTCTTC TGGTGCTGCT
GTTGAAGAAG CCGAAGAAGA AAAGGCTGAA GAAGCTAAGG AAGAATCCGA CGACGACATG
GGTTTCGGTT TGTTCGATTA AGCAAGCAAA TGTACAAATA TAGTCTAACA GGTTGGTTGT
CAAACCGATT TTACATTGGG TTACTACATA GTTGTTATAT TGGTCATTTC TCTTAATTTA
ATAAATAAAA AAGTATG
|
|---|
| Protein sequence | MKYLAAYLLL VQGGNASPSA ADVSALLETV GVEAEESRVA SLLAELEGKD VNELIALGNT
KLASVPSGGA AVASSGAAAS SGAAVEEAEE EKAEEAKEES DDDMGFGLFD
|
|---|
| |