| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_86747 |
|---|
| Symbol | DLD1 |
|---|
| ID | 4851982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 3354353 |
|---|
| End bp | 3356294 |
|---|
| Gene Length | 1942 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | |
|---|
| GC content | 44% |
|---|
| IMG OID | 640393690 |
|---|
| Product | mitochondrial enzyme D-lactate ferricytochrome c oxidoreductase |
|---|
| Protein accession | XP_001386966 |
|---|
| Protein GI | 126276207 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.180539 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.534514 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CAACAATTAG GTCCTCCGCT TTACTATTAT ATACCAAAAT ACTATAAAAA GCTATTTTTG
CATTTCTTTC TGATGTTTCT CCTTCGCAGA ACAGCTTCGT CAACAGCCTG GAGAAGAGCA
GGGCTCAGAA GTCTCAAGCG CTTCTATTCC GATAGTGCAC CCAAGTCTTC TGGAGTTGCT
ACCAGTGCTT CCATAGCCTT CTTCGGTGGA TCCGTCTTTG GGGCAGCAGT CTACAAGTTT
CTGGTGAGAA ATCAAGACAC ATTAAACAGT AAGGTGATCC CTCCTTCTAC TTCTGATGAT
CAAGCAACTA CTTCAACTCT CCCATTGGAT AAGTTGGAGT CCCCAGTCTA TGCTACCAAA
GAAGAAATCG AGACAGCTAT ACAAGAAATC AAACACATCT TCAAAAAGAA TACACCGGCT
GGAGTAGAAT ACGACGAGTC TATATTCATC AACAATTCCA AGGAAGAATT GGATTCCCAC
TCAGATACCT ACTTCAATTC GCACCACGCT GCTCCAGACG AAAGGCCAAT GTATGTTGTA
TGTCCGCGTC TGACTCAGGA AGTCGCGGAG ATCATGAAAG TGTGTCATTC TTATAAGATC
CCTGTAGTGC CCACAAGCGG TAGATCGTCT TTGGAGGGCC ACTTCATTCC CAGAAGACAT
GGAATCACCA TTGACATTTG CAACATGGAT CAGATTGTTA AGTTGAACAA GTCAGACTTG
GACATTACTG TTCAAGGAGG TGTAGGCTGG GAAGCATTGG CAGACTACCT TGAAGAGTAC
AATCTTCTTT TCTCGTCAGA CCCTGGCCCA GGAGCTACCA TCTCGGGGAT CTGTGCCAAC
AACGCTTCTG GAACTAATGC CAGTAGATAT GGAGAAACAT ACAAGAACGT TCTCAGTTTA
ACTGTGGTTT TGGCTGATGG AACGGTTATA AAAACTAAAC AGAGACCAAG AAAATCTAGT
GCAGGCTACA ACTTGAATTC ACTTTTTGTA GGAAGTGAAG GTACCCTTGG AATTATCACC
GAGGCTACAC TTAAGCTTCA TGTCAAACCC GCCAAAGAAT CCGTCATTGT GGTCCCCTTC
AAGACGATTG AGGATGCTGC CAATACTGTT AACGACATCT TGTTGAAGGG AATGGAGTTG
AATGCTATTG AGTTGTTAGA CGACAAGATG ATGCAGGTGA TCAATCAAAG TGGAGAAACT
AGTCGTCGCT GGACCGAAGC TCCTACCCTC TTCTTGAAGC TTGGAGGCGC TAATCAGCAA
TCGCTTGATT GTATCGTCGA GGAGATAGAA GGTATCGTCA AAAGTAACCA TAACCTTGAT
TTCCAGTTTG CCTCTAACGA TGACGAGAAG ACGGAACTCT GGTCTGCCAG AAAAGTAGCA
TTGTGGTCTA CCATCAACTT GGGAAAAGAG ATAGACCCCA CCATGCTTCT TTGGACAACG
GATGCTGCTG TGCCCATCTC GCAATTGCCC AAGTTCTTAG CAGAAACCAA GGCTGATATA
GACAGTCACG GTTTGAAGAA CACATTGGTA GCACATATTG GAGACGGAAA TGCGCATTCG
TTCATCTTGT ATACGCCTGA ACAACGAGAA GTCGCCCAGA AAGTTGTTGA TCAAATGGTG
CAAAGAGCCG TAGCACTCGA AGGAACCTGT ACAGGAGAGC ATGGTATTGG TTTCGGTAAG
CGTGAGTTCC TAGTAGAAGA AATAGGAGAG TTGACTATAG ATGTGATGAG AAAAATCAAA
CTAGCATTGG ATCCTCTTCG AATTTTAAAT CCAGACAAGG TTTTCAAGAT CGATCCACAC
GAAAAGCCAC TGTTCCATGG AAATTTCCAG AAATGATCAT AAACGTCGTA AAGCATAGTA
TTATAGACGT ACATCCTACG GCCCTTATGA AGGTATCGTA AATGGAGAAT TGAATCATAG
CAAACAATTA GATAGATTAT AG
|
|---|
| Protein sequence | MFLLRRTASS TAWRRAGLRS LKRFYSDSAP KSSGVATSAS IAFFGGSVFG AAVYKFLVRN
QDTLNSKVIP PSTSDDQATT STLPLDKLES PVYATKEEIE TAIQEIKHIF KKNTPAGVEY
DESIFINNSK EELDSHSDTY FNSHHAAPDE RPMYVVCPRL TQEVAEIMKV CHSYKIPVVP
TSGRSSLEGH FIPRRHGITI DICNMDQIVK LNKSDLDITV QGGVGWEALA DYLEEYNLLF
SSDPGPGATI SGICANNASG TNASRYGETY KNVLSLTVVL ADGTVIKTKQ RPRKSSAGYN
LNSLFVGSEG TLGIITEATL KLHVKPAKES VIVVPFKTIE DAANTVNDIL LKGMELNAIE
LLDDKMMQVI NQSGETSRRW TEAPTLFLKL GGANQQSLDC IVEEIEGIVK SNHNLDFQFA
SNDDEKTELW SARKVALWST INLGKEIDPT MLLWTTDAAV PISQLPKFLA ETKADIDSHG
LKNTLVAHIG DGNAHSFILY TPEQREVAQK VVDQMVQRAV ALEGTCTGEH GIGFGKREFL
VEEIGELTID VMRKIKLALD PLRILNPDKV FKIDPHEKPL FHGNFQK
|
|---|
| |