| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_86741 |
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| Symbol | |
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| ID | 4851576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2186709 |
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| End bp | 2190702 |
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| Gene Length | 3994 bp |
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| Protein Length | 1081 aa |
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| Translation table | |
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| GC content | 40% |
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| IMG OID | 640393284 |
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| Product | predicted protein |
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| Protein accession | XP_001387004 |
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| Protein GI | 126274909 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport
[Y] Nuclear structure |
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| COG ID | [COG5101] Importin beta-related nuclear transport receptor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000190856 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TCCATTTCAA GGTAGTCGAA TTCGCCCCAA AAGCTGTTTG TGAGTGAGAG AAAATCTGCC
AATCACACCG TGCGCCTGTT CTGTCCGTCT CTGAGCTGCT CGTGTCCCCA CTTGCACCCC
CTTTACACCG CACACTATTT CTCCCCGATC CAGAAAACAC TTCACAAATC TCGCCAAACA
AATCCATCAC CTTTTTCTTT GTGCTCACCA AAAAGCTGTA GCCCTGCTTT TACCGTTGAT
TGCCATCACT AAGATAGTGT TAGCTGTTAA CCGTTATACT CACTGCTAGG AACTGTTTAT
TATTCCCTTC TGTCAAGTTT TCAGTTGATT CTACTACTCT TAGTATTATT GCTGAGAATT
CGTGATTTTC CATTAGAATT ACATTTGTTA TTCGGTTCTA GACTAAGGCC GATACAATCT
TTACCTCGCC GTTAAGAAAA TGGAATCTGT TCTCGACTTC TCGAAGGAGC TAGATATCGC
TCTCTTCGAC CAGATCGTCG ATTCCTTCTA CAAGGGCTCT GGAGCTGATC AGAAAAATGC
CCAGGCCATC TTGAACCAGT TCCAGGAAAA CCCAGAGTCC TGGAAACGTG CTGATCAGAT
TCTTTCTTCG TCTAACAATG CTCAGTCTAA GTACATTGCC TTGTCGTGTT TGAATAAGTT
GATCCAATAT CGGTGGAAAA CAATCCCCGA AAACGAACGT ATCGGAATCA GAAACTTCAT
TGTCAATATG ATCATTACTT TATGTGACAA CGAAGAGGTT TTTGAAACTC AGCGTGCCTT
GATTAACAAG ATCGATTTAA CATTGGTTTC CATCTTGAAA CAGGAATGGC CACACAACTG
GCCCCAGTTC ATCCCGGAAA TCGTTTTGAG CTCACGCTCC AGTTTCAACG TCTGTGAAAA
TAACATGATA ATCCTTAAGT TGTTGAGTGA AGAAGTCTTT GACTACAGTC AAGACCAGTT
GACTCAAGCT AAGGCTCAAG CCTTGAAAAC GTCTATGAGA GCCGAATTCG AAGAAATCTT
CAAATTGTGT TACGAAGTGT TAGACAAAAC CTCTAAACCA TCATTGATCA CCTCTACTTT
GAATGCGTTG TTGAAGTATA TCCACTGGAT TCCTTCTAAC TACATCTTCC AAACTAACTT
GTTGGATTTG CTTTCCACCA AGTTCTTGGC TCCAGCCGAT ACCAGAGCGA TTGCCCTTAA
ATGTTTGACG GAAGTGGCCA GTTTACAATC GCCAGGAAAC GAAGAAAAAT TCGTCTTGTT
ATTCAAGAAC TCCATGGAGC AAATCTACAA TATCATACCT ACCACTACAA ACTTGAAAGA
ATCGTACCAA GTAGCCAGTT CCAACGATCA GTCGTTCTTA CAAGATTTGG CCATGTTCTT
GTGCACCTTC TTGGGAAACC ACTTGATACC ATTAGAGCAA AATGACTCTT TAAGGGACTT
GTTATTAAAT TCATTATTTT ATTTGCTAGA GTTGTCGAGA ATTGAAGAAC GAGAATTGTT
CAAGACCTGT TTAGACTTCT GGAGTTCGTT TGTTCATGAA TTATTTATTG AGATACAAAA
CTTACCCAAG TCGGAATTGA CTCCAATGTT ACAACTCCAA TACGGTAGTA CATTAAAGAC
TTCTGGTGGA GCTCCAGATC CAGCAGCCTT AGCCAAGTTC CCATTGAGAC AACACAAGTA
CGCCAAAATC TTGTCCAAGT TGAGATTAGT AATTATTGAG AACATGGTCA GACCAGAAGA
AGTCTTAGTT GTGGAAAATG ACGAAGGTGA GATTGTCCGT GAATTCGTCA AAGAGAGTGA
TACGATCCAA TTGTACAAAT CTATGAGAGA AGTTTTGGTT TATTTGACCC ATTTGAATGT
TGTTGACACT GAACAGATCA TGAGCGAAAA GTTAGCAAGA CAAATCGATG AAAGCGAATG
GTCTTGGCAA AACATCAATA CCTTGTGTTG GGCTATTGGT TCCATTTCGG GTACAATGAA
TGAAGATATG GAAAAGAGAT TCTTGGTCTC TGTGATCAAA GATTTATTGT CGTTGACCGA
AATGAAAAGA GGTAAAGACA ACAAGGCAGT CGTAGCTTCT AACATTATGT ATATTGTTGG
TCAATACCCT CGTTTTTTGA AAGCCCACTG GAAGTTCTTA AAGACAGTTG TCAACAAATT
GTTTGAATTC ATGCACGAAA CCCACGAAGG TGTGCAAGAC ATGGCTTGTG ATACTTTTAT
CAAGATCACC ACCAAATGTA AGAAGCATTT CGTGGCAGTA CAACAACAGG AGCGTGAAGC
ATTCATCAAT GAAATTATCC GCAACATCCA ATCTATCACA GAAGATTTAC AACCTCAACA
AGTTCACACA TTCTACGAAG CTTGTGGTAT TATTGTCAGT GCTCAAACAC AGAAAGATGC
CAGAGACAAA TTGTTAGGAG AGTTGATGGC ATTGCCTAAT ATGGCTTGGA GCTCTATTAT
TCAACAGGCT GGACAAGACC CACAATTATT GACTAATACT GATACCGTCA AGATCATTGC
CAACATCATC AAGACTAACG TCGCTGTCTG CAAGGCATTG GGACCTGGAT TCTACTCACA
ATTGGGATTG ATGTACGTGG ATATGTTGTC CTTGTACAAG GCAGTTTCGT CCATGATTTC
AGACTCCGTA GCAAAGGACG GATTGATTGC TACCAAGACG CCAAAGGTAA GAGGTTTGAG
AACCATCAAG AAGGAAATTT TGAAGATGAT TGAAACCTAT ATCAATCAGG CAGACAACTT
GGAAGAAATT GTTCGCGACT TGGCCCAGCC ATTGTTTGCT GCAGTTTTGG AAGACTACAG
TAGCAACGTT CCTGATGCAA GAGACGCTGA AGTGTTGAAC TGTATGACGG CACTTGTTTC
CAAGGTTGGC CATATGATTC CAGAAGGTGT TGTTCTTATT TTACAAAACA TTTTTGAATG
TACATTGGAT ATGATCAAGA ATGATTTTGT TGAATACCCA GAACACAGAG TAGAGTTCTA
CAAGTTGTTG AAGGAAATCA ACTCCAAGTC ATTCCAAGCT TTGCTTCAAT TATCAGGTGA
TGCTTTCCAA TCGCTAATCA ATGCAGCATT GTGGGCATTT AAACACAACA ATCGTGACGT
CGAAGACAAC GGTTTATCAT TGACATTGGA GTTGATTGAA AATGTCGAAA AATTGGGTGA
TACTCCTTTC ACAAAGGCAT TTTACACAAA CTTCTACTTC CAAATCTTGT CTGATACACT
TTACGTCTTT ACTCAACCTG ACCACAAGGC CGGATTTAGA TATCAATCAC AATTATTGGC
TCAATTGATC CATCTTGTCC AGGATGATGT GATTAAGTAC CCTTTGTACA CCTCTGAACA
AGCCCCCGAA GGTACTTCTA ATTCTGCATA CTTGAAGCAA TACCTTGCAC AACTTTTAGC
ATCTGCATTT CAAAACTTGC AGAAGGAGCA ATTGGTCAAC TTCCTTCAAG TTTTGACGAC
AGTCTACAAT GACATATATA AATTCAAGGC TACTTTGAGA GACTTCTTGG TGCAATTGAA
GGAATTCGGA GGTGACCCAA CAGACTACTT GTTTGCTGAA GATAAAGAGA TCGAAAGACA
AGAGCAAAAT AGACTTCAAA GACAGAAAGA TTTGCAAGTC GGTGGGTTGA TCAAACCATC
CGAAATGGAC GACGATGAAT TATAGAATTC CTTGCCAAAA ATTCTCTATC TGCCATCCAC
CCTGTATCAA TAGTTAATTG CATAATGTTA GGTATACTAA CATTTCAACC CGTCCCACCT
CCACTACAAC TTCTTTAACT CATGGATAGA AATTTGGGGG GTGTACTTTT TTTGTCTTCC
CAAGTAGGGG AAGCTGATAT TATTTTTGAA TATTCTAAAT CTTTATCTTT GATTATGGAG
ATGGGAAACC GTCTATACCA TTCTTGGTTC CGTCACAGAT TATTACACTA ATATTATAAA
TAAATAAATA TAAATAAATA AATGAAATAA GTTT
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| Protein sequence | MESVLDFSKE LDIALFDQIV DSFYKGSGAD QKNAQAILNQ FQENPESWKR ADQILSSSNN
AQSKYIALSC LNKLIQYRWK TIPENERIGI RNFIVNMIIT LCDNEEVFET QRALINKIDL
TLVSILKQEW PHNWPQFIPE IVLSSRSSFN VCENNMIILK LLSEEVFDYS QDQLTQAKAQ
ALKTSMRAEF EEIFKLCYEV LDKTSKPSLI TSTLNALLKY IHWIPSNYIF QTNLLDLLST
KFLAPADTRA IALKCLTEVA SLQSPGNEEK FVLLFKNSME QIYNIIPTTT NLKESYQVAS
SNDQSFLQDL AMFLCTFLGN HLIPLEQNDS LRDLLLNSLF YLLELSRIEE RELFKTCLDF
WSSFVHELFI EIQNLPKSEL TPMLQLQYGS TLKTSGGAPD PAALAKFPLR QHKYAKILSK
LRLVIIENMV RPEEVLVVEN DEGEIVREFV KESDTIQLYK SMREVLVYLT HLNVVDTEQI
MSEKLARQID ESEWSWQNIN TLCWAIGSIS GTMNEDMEKR FLVSVIKDLL SLTEMKRGKD
NKAVVASNIM YIVGQYPRFL KAHWKFLKTV VNKLFEFMHE THEGVQDMAC DTFIKITTKC
KKHFVAVQQQ EREAFINEII RNIQSITEDL QPQQVHTFYE ACGIIVSAQT QKDARDKLLG
ELMALPNMAW SSIIQQAGQD PQLLTNTDTV KIIANIIKTN VAVCKALGPG FYSQLGLMYV
DMLSLYKAVS SMISDSVAKD GLIATKTPKV RGLRTIKKEI LKMIETYINQ ADNLEEIVRD
LAQPLFAAVL EDYSSNVPDA RDAEVLNCMT ALVSKVGHMI PEGVVLILQN IFECTLDMIK
NDFVEYPEHR VEFYKLLKEI NSKSFQALLQ LSGDAFQSLI NAALWAFKHN NRDVEDNGLS
LTLELIENVE KLGDTPFTKA FYTNFYFQIL SDTLYVFTQP DHKAGFRYQS QLLAQLIHLV
QDDVIKYPLY TSEQAPEGTS NSAYLKQYLA QLLASAFQNL QKEQLVNFLQ VLTTVYNDIY
KFKATLRDFL VQLKEFGGDP TDYLFAEDKE IERQEQNRLQ RQKDLQVGGL IKPSEMDDDE
L
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