Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_86644 |
Symbol | |
ID | 4851801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 2867071 |
End bp | 2867672 |
Gene Length | 602 bp |
Protein Length | 145 aa |
Translation table | |
GC content | 39% |
IMG OID | 640393509 |
Product | predicted protein |
Protein accession | XP_001386883 |
Protein GI | 126275642 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5030] Clathrin adaptor complex, small subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.339516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CAAAAAGCTG CGTCCAAAGC AGAAAGCATC CGAAACTCAA TACCAAAGCT CAGTTATAGA CTCAATTCCT GACTTTTCAA AAAAAAACTC CCAAACTTCA CTGATATCGG CGCAAAAATG TCAATACACT TCATACTTGT TCTCAACAGA CAAGGCAAAA TCCGGCTAGC AAAATGGTTC AACAACAGCT ATACACAAGA AGACAAACAC AAGTTTGTGC TGGATATTCA TCGTCTTATA AGTTCACGTG ATACGAAGAA GCAGTCGAAT TTTGTAGAAT ACCAACTGAC CAAATTGGTA TACCGAAGAT ACGCTGGGCT ATATTTCATT TGTTCAGTAG ATTTGGTGGA TAGCGAGCTC AGCTATCTTG AATCGTTGCA TTTTTTGGTC GAGATCTTGG ATACGTACTT TGACAATGTC TGCGAGTTGG ATTTAGTATT TAACTTCTAC AAGTTATACA ACATCTTAGA TGAGATCTAC TTGGGTGGAG AGATCCAGGA AATCCTGAAA AAGAAGATCC TCGACCGATT GGCGTATTTG GACAAACTTA GCTGATCCAG CTCCTTTGTA CATTAGTCTA TAAAATACAC AGCATTAGTT TT
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Protein sequence | MSIHFILVLN RQGKIRLAKW FNNSYTQEDK HKFVLDIHRL ISSRDTKKQS NFVEYQLTKL VYRRYAGLYF ICSVDLVDSE LSYLESLHFL VEILDTYFDN VCELDLVFNF YKLYNILDEI YLGGEIQEIL KKKILDRLAY LDKLS
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