Gene PICST_86644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_86644 
Symbol 
ID4851801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp2867071 
End bp2867672 
Gene Length602 bp 
Protein Length145 aa 
Translation table 
GC content39% 
IMG OID640393509 
Productpredicted protein 
Protein accessionXP_001386883 
Protein GI126275642 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5030] Clathrin adaptor complex, small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.339516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CAAAAAGCTG CGTCCAAAGC AGAAAGCATC CGAAACTCAA TACCAAAGCT CAGTTATAGA 
CTCAATTCCT GACTTTTCAA AAAAAAACTC CCAAACTTCA CTGATATCGG CGCAAAAATG
TCAATACACT TCATACTTGT TCTCAACAGA CAAGGCAAAA TCCGGCTAGC AAAATGGTTC
AACAACAGCT ATACACAAGA AGACAAACAC AAGTTTGTGC TGGATATTCA TCGTCTTATA
AGTTCACGTG ATACGAAGAA GCAGTCGAAT TTTGTAGAAT ACCAACTGAC CAAATTGGTA
TACCGAAGAT ACGCTGGGCT ATATTTCATT TGTTCAGTAG ATTTGGTGGA TAGCGAGCTC
AGCTATCTTG AATCGTTGCA TTTTTTGGTC GAGATCTTGG ATACGTACTT TGACAATGTC
TGCGAGTTGG ATTTAGTATT TAACTTCTAC AAGTTATACA ACATCTTAGA TGAGATCTAC
TTGGGTGGAG AGATCCAGGA AATCCTGAAA AAGAAGATCC TCGACCGATT GGCGTATTTG
GACAAACTTA GCTGATCCAG CTCCTTTGTA CATTAGTCTA TAAAATACAC AGCATTAGTT
TT
 
Protein sequence
MSIHFILVLN RQGKIRLAKW FNNSYTQEDK HKFVLDIHRL ISSRDTKKQS NFVEYQLTKL 
VYRRYAGLYF ICSVDLVDSE LSYLESLHFL VEILDTYFDN VCELDLVFNF YKLYNILDEI
YLGGEIQEIL KKKILDRLAY LDKLS