Gene PICST_86597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_86597 
Symbol 
ID4850867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp275358 
End bp276340 
Gene Length983 bp 
Protein Length314 aa 
Translation table 
GC content43% 
IMG OID640392575 
Productpredicted protein 
Protein accessionXP_001387703 
Protein GI126273782 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATCG CCGCCATTTC TCCCCTAACC AGCCAGCTAG TCGAAGTTTC CAAAGGTGGA 
CCTCGCCGAA CGGTTCCGTT ATCACTTCTT CTCAGTCTCA ACCAGTTGTT GAAAAAGTCC
ATTTTCTCGA GAAAATTCTA CCAGGAAATC AACGACAAGG TATTGGCGAA GTCAAGCACT
GTAGACACAA ACCTCTATTT CATCTGCTAC TTCACTTTGC TTGTTTCTGC CATTTTGAAC
AACAAGAGCC ACATCAAACA TTTTCTTCAG ACCCAAAAGT ACAACTTGAT TCAAGTAGTA
AAGAAGGTTC TTCAGAACAC TTTGGGCGAA CGTGCTTCCG ACTTGACAAA TACAAACAAC
AAGTTCGTCA ACAAATTGTT CTCGACCCCA AAGCCGGTGT ATACCGAGGG TAAGCCATCA
AAACTTGCTG TTCACTTCAA GGCTATCAGC TCGTATTTGG CTGATATCAG AATTTTCAAC
AGACTCACCG AGTCGATCAA GTACATGCCT TGGATCATTG ACGAGTATAG AGCGTATGCA
GACCCTTCTA ATCCTGTTCC TAAGTTTACT CGCTTTGTCA ATTTGCTCCA ATCGCTCAAC
TGTTTGGCTT TAGAATTGCT TGAAAACGCT GGTTGGATTA CTGACCATAA CTGGGTTGGA
ACTGGTGATA ATGCTTGGTG GTGCACCGAG ACTTACATCT GGTGCTCGAG AATCTGGGGT
GCTTATCTTG TAATTGAGAT TCTAGAGTTA GTCAGAAGAA ACCCTGTAGC CAAATGGGAT
TCGAATTGGA AAATCGCTAT GTTCAAGCAG TTGATCCAAG TTCCTTTGGT TCTCCATTGG
TCTTTATATG ATGGCTGTTT GACTCCATTC TGGGTGGGAG TCTGTGGTTG TGGTGCTTCT
TGGTGGGGCT TCAAAGACAT GTGGAGCTCT ATTGACTTAA GTTGAGCATA ATATCATATT
ATTTATTAGA ATATAGAAGA CTT
 
Protein sequence
MSIAAISPLT SQLVEVSKGG PRRTVPLSLL LSLNQLLKKS IFSRKFYQEI NDKVLAKSST 
VDTNLYFICY FTLLVSAILN NKSHIKHFLQ TQKYNLIQVV KKVLQNTLGE RASDLTNTNN
KFVNKLFSTP KPVYTEGKPS KLAVHFKAIS SYLADIRIFN RLTESIKYMP WIIDEYRAYA
DPSNPVPKFT RFVNLLQSLN CLALELLENA GWITDHNWVG TGDNAWWCTE TYIWCSRIWG
AYLVIEILEL VRRNPVAKWD SNWKIAMFKQ LIQVPLVLHW SLYDGCLTPF WVGVCGCGAS
WWGFKDMWSS IDLS