| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_86570 |
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| Symbol | ATP1 |
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| ID | 4851467 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1891514 |
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| End bp | 1893877 |
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| Gene Length | 2364 bp |
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| Protein Length | 545 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640393175 |
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| Product | F1F0-ATPase complex, F1 alpha subunit |
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| Protein accession | XP_001387600 |
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| Protein GI | 126274595 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTTTTAGTAA CACCACAATT TACTAACAAG TTACAATGTT GTCGGCTCGT CCTGTTTTGC
GTACTGCTGC CCGTTCTGCC GCCGTTGCTG CCAGAACCTT GAGAGTTGTA AGTATTTGAA
TGAATTCTCG GGATGTAAAT CCAATAGTAA AATCAATAGC ATTCAACAAC TTCCGTAAGA
AGTCAACAAT AGTCCATGAT TGTCTCAACA ACATCCAACA AGGATTAATC GCCGAACAAT
TGTAGATATC TGTACACTGA CGAATACCAT TGTCGTCCGT GGGCATTTTC TGTTTTTGCA
GTAGAAAGTT CTGGCAATTT GAATTATTGA TTCAACAAAA GTCGACGTAT GTTGAATCAG
AAAGTCAATT CACCACACAA TTGATTCCCT AAGGCTGAAC TGCTATCCTT ATTACCATCA
CAGTTATTCC TTCATTGAGT ACCATTAATA TCGGCATTGT TGTCTTCTTG TTATTGTTTC
TTACTATTAC TAAGTTTCCT GACATGTACT AACATCTTTA GGCTCGTCCA ACTCTCTTGA
CTGCTCAACG TTTTGCCTCC GCCAAGGCTG CTCCAACTGA AGTCTCCTCC ATCTTGGAAG
AAAGAATCAG AGGTGTCTCC GATGCTGCCA ACTTGAACGA GACCGGTAGA GTCTTGTCCG
TCGGTGATGG TATTGCCCGT ATCTTTGGTT TGAACAACAT TCAAGCTGAA GAATTGGTTG
AATTCGCCTC CGGTGTCAAG GGTATGGCCT TGAACTTGGA ACCAGACCAA GTCGGTGTTG
TCTTGTTCGG TTCGGACAGA TTAGTCAAGG AAGGTGAAAC CGTTAAGAGA ACCGGTAAGA
TTGTCGATGT TCCAACTGGT CCAGAATTGT TGGGTAGAGT TGTCGACGGT TTAGGTAACC
CAATCGATGG TAAGGGTCCA TTGAACGCTT CCTCTTCCTC GAGAGCTCAA GTCAAGGCTC
CAGGTATCTT GCCAAGAACC TCTGTGTTCG AACCTATGCA AACTGGTTTA AAGTCTGTTG
ATGCTCTTGT CCCAGTCGGA AGAGGTCAAA GAGAATTGAT CATTGGTGAT CGTCAAACCG
GTAAGACCGC CGTCGCATTG GACACCATCT TGAACCAAAA GAGATGGAAC AACGGTGCTG
ACGAATCCAA GAAGTTGTAC TGTGTCTACG TTGCCGTTGG TCAAAAGAGA TCCACTGTAG
CCCAATTGGT CCAGACCTTG GAACAAAACG ATGCTCTTAA GTACTCCATC ATTGTCGCTG
CCACTGCCTC GGAAGCCGCT CCATTACAAT ACATTGCTCC TTTCACTGCC TGTGCTATTG
GTGAATGGTT CAGAGACAAC GGTAAGCACG CTTTGATTGT CTACGATGAC TTGTCCAAGC
AAGCTGTTGC CTACCGTCAA TTGTCATTAT TGTTGAGACG TCCTCCTGGA AGAGAAGCTT
ACCCTGGTGA TGTTTTCTAC TTGCACTCTA GATTGTTAGA AAGAGCTGCT AAGATGTCTC
CAGTCCACGG TGGTGGTTCT TTGACCGCTT TGCCAGTCAT TGAAACCCAA GGTGGTGATG
TTTCCGCTTA TATTCCAACC AACGTTATTT CCATTACCGA TGGTCAAATT TTCTTGGAAG
CTGAATTGTT CTACAAGGGT ATCAGACCAG CTATTAACGT CGGTTTGTCC GTCTCCCGTG
TCGGTTCTGC TGCTCAAGTC AAGGCCATGA AGCAAGTCGC TGGTTCCTTG AAGTTGTTCT
TGGCCCAATA CAGAGAAGTC GCTGCCTTCG CCCAATTCGG TTCCGATTTG GATGCCTCTA
CCAAGCAAAC CTTGAACAGA GGTGAAAGAT TGACCCAATT ATTAAAGCAA AAGCAATACT
CTCCATTGGC TGCTGAAGAA CAAGTCCCAT TGATTTTCGC TGGTGTCAAC GGTTTCTTGG
ACGAGATTCC TCTTGAAAGA ATCGGTGAAT TCGAAGAATC CTTCTTGGCT CACTTGAAGG
CCAACGAAAC CGAAATCTTG GAAGCCATCC AAGTCAAGGG TGAATTGTCT AAGGAATTGT
TGGAAAAGTT GAGATCCACC ACTGAAACTT TTGTTTCTAC TTTCTAAGTC TTTTAGTAAA
CTTTATCACC ACCAAAAATG AATAGAAGAA CGTCGCATTG AAATCAATTC ATGGTGTTTT
GTTTTCTGGT GTTTAATTCT TGGAAGACAT ATGTAATGTT TTCTCTATTC TCTTTAGATG
ACTCCACTTC CGTTTTCAGG CATTTATTTG AACTTTGATT TATTGCTATT TTTTTACTAA
GGTGTCGGCT GGTTTCCTTC GGGGAGCTAC TTGCACATCA AAAAAGAAAA TACTCATATA
TAAGAAATAC AAGTATTCCG TATT
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| Protein sequence | MLSARPVLRT AARSAAVAAR TLRVARPTLL TAQRFASAKA APTEVSSILE ERIRGVSDAA
NLNETGRVLS VGDGIARIFG LNNIQAEELV EFASGVKGMA LNLEPDQVGV VLFGSDRLVK
EGETVKRTGK IVDVPTGPEL LGRVVDGLGN PIDGKGPLNA SSSSRAQVKA PGILPRTSVF
EPMQTGLKSV DALVPVGRGQ RELIIGDRQT GKTAVALDTI LNQKRWNNGA DESKKLYCVY
VAVGQKRSTV AQLVQTLEQN DALKYSIIVA ATASEAAPLQ YIAPFTACAI GEWFRDNGKH
ALIVYDDLSK QAVAYRQLSL LLRRPPGREA YPGDVFYLHS RLLERAAKMS PVHGGGSLTA
LPVIETQGGD VSAYIPTNVI SITDGQIFLE AELFYKGIRP AINVGLSVSR VGSAAQVKAM
KQVAGSLKLF LAQYREVAAF AQFGSDLDAS TKQTLNRGER LTQLLKQKQY SPLAAEEQVP
LIFAGVNGFL DEIPLERIGE FEESFLAHLK ANETEILEAI QVKGELSKEL LEKLRSTTET
FVSTF
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