| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_86507 |
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| Symbol | LAS21 |
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| ID | 4851206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1192706 |
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| End bp | 1195483 |
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| Gene Length | 2778 bp |
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| Protein Length | 901 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640392914 |
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| Product | major facilitator superfamily involved in the attachment of glycosylphosphatidylinositol (GPI) anchors to proteins |
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| Protein accession | XP_001387876 |
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| Protein GI | 126274192 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0578339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTGCCATCTT GCAACTATAT TGACGGCTGA TGGGTCTGAC GTCTTTAGCC ACACGCTGGG
TCGTGCAATT GCTTCTTATA GGTGCACATA TTGCCGGACT CTTGCTTTTT TTCCGCGGCT
TCTTTCCTTC GAAAGTAGTA CTTCCAGGTT TCGGCAACTT CCACAATGGG GCATCTCCGT
TTGCTGAACG AGGCAAACCT CAGTTCGACA AGGTCATTGT CATGGTTGTA GATGCTATGA
GAGCAGACTT TTGCTACTCA CAGGAACATT CTCATATGAC TTTTCTTCAC GAGTTGATCA
ACGACGGTAA AGCTGTTCCA TTCACTGGGT TTTCCCATCC CCCCACAGTG ACTCTACCCA
GACTCAAAGG TATCACCACA GGAGGCACGC CTAACTTTTT GGACGCAATT CTTAATGTCG
CTGACGACAA GGACCAATCG CAGGGCTTGC TTTCGCAGGA CTCGTGGATC TACCAGTACA
AGAAGTTGGG TAAAAGCATC AACTTCTATG GTGACGATAC CTGGTTGAAG TTGTTTCCTG
GCCAGTTCGA CAAGGTCGAG GGAACCAACT CTTTTTTTGT CAGCGACTTC ACGGAAGTTG
ATCTCAATGT CACGAGACAT TTGACGGAAG AACTCGACAG ACAGCAATCG CGTTGGGACG
GCTTGATTTT GCACTACTTA GGTCTAGACC ATATTGGCCA TAAGGGGGGC CCGAACTCTG
TCTTCATGAA ACCGAAGCAA GAGGAAATGG ATAGCGTGCT TCGAAGATTG TATGAATATG
CTGAAACTTC TCAGAAACGT AAGGAGAGTG TTCTTATTGT CCTTATGGGA GACCATGGGA
TGAACGAAAT AGGAAACCAC GGTGCATCTT CTGTCGGTGA AACCAACGCA GCGTTGCTGT
TTATTTCACC CAAGTTTAAC CACAAAAATG AGCAAAAAGC TCCATTAGCT GATTCTCCAG
ATTACTCGTA CTACTCTTCG GTAAGTCAAA TCGATTTGGT GCCTACTTTG GCTGGACTTT
TGAACTTTCC AATTCCTAAG AACAGTTTGG GGATTATCAT CAGAGAGCTT TTAGAGCTTT
GGCCTAGTGA AAAGCAGAAG TTGGCCATTT TGATGGAAAA CTGTAACCAA TTCATGGATT
TGTTTTCTGC AAAACACGAT AAGCTGGAAC ACTTGGATGT GTGGGAGAAA TGGAGTCAAT
TGCAAGATTC GAAGGTAGTT AGTTCTATTG ATGATCACTT TGACTTCTTG TTAAAGGTAC
AAGATATTTT GGCATCTGCT GCTACGAACT ATAACTATGA TGATATGTGG ACGGGATTTG
CTTTGACTGT TGTTTCGGCT GTAGTTACGT TGATTACGTT CAATTCGTAC TTCTTGAAAC
AGTCTGAAAA TTCTTTCAAG TTAGCCCAAT ATTTCCAGTT ATTTGCCATA GTGTACTCGC
TACATTTCCA TGGTTCTTCA CTAATTGAAG AAGAACATCA GCTCTGGTGG TTCTTTACTG
TCTTGAGTTT TGTATATCTA GCTTTCACAT GTTTCGTTTT GAACAGAACC AATGCCTTCT
ATTGGAGTTT GATATTCATT GGAATAAGAA TCATCAGATC ATGGAACAAT AGTGGTCAAA
AATACTCATC GTCCAACACG ATTTCATACT ACTTGCTCAA TGAAAACAGC GACTTGTTGT
GGGCGTTAAA CTTGATCACT TACTTGGTGA CCACAGTAGC CATTTTTGCA CAAGGAAGAA
TTGTCGAGTG TTTAAGTATT CTTAACGATT CACAAGGCAG AAATTCAGAT TTCCAGCAAG
CAGGAAATTT GTTGTCTTTT GTCCTTATCT TTGTAGCCAG CTCTATTTCG TTCCTGTTCA
AAGTATGCCA ATACTACAAT GATGGCTATG ATGTACCTGG TTGGCTCAAT TTCTTGTTTA
AATGGGTGTT GAGTTCATAT GATGTCGATA TCAAATCGTT AAACGACCCT GATTTCAAGT
TCCAATTACA GGACCTAAAT ATTCTGATTG CCAGACTAAG TGGCTACTTC ATTTTGGGCA
TCTTGGGTCT TAGAATTGTA GCAGGAAAGA TCAAGAAGCT TAGCTCTGGA ATCATCACGG
ACATGATTAA CATTTCCACC TTGTATTTAT TACAGCAGTC CAAATATGAA AATATTCCGA
TGTTCCTTAC CTTCATGTTG ATCAAGTTTG CCTTCACCAA GTTGGTTGTG TCAGTTCAAG
TTAAAGGGGT TGACATTGAT CAGCTCATTG CAATCTGTGC AATTTTCACC ATTTGCATGC
AAAATCTTTC GTTCTTCTGC TTGGGAAACA CAAACCTGTT GGCCACTGTA GATTTGTCCA
ATGCATACAA CGGAATCAAA TCGTATGATG TTATCCCGGT GGGTGTTTTG ACATTCTTGT
CGAACTTCGT AGCTCCAGTG TACTGGTCTC TCTCGGGACT CCAGATATTC TTCGAGCCAT
CCAGAGTTTT GTTCAACAGT GAGTTAGCGT CCAAAGACTT GATCAACTTC CTGTTCTTAC
GCAAATCGGT TTTCTTGGTG AAATCAAATG TGACATTAGT TTTCTATGCT ATTGCTGCTG
TCAACCTTCT TGGTTCTTGT ATTAATTTGA GATTTCACTT ATTTATTTGG ACGGTGTTCT
CACCAAAGTT GTTGTACTTT GCCAGTTGGT CTGTGTTGGT CAACTTCTTT GTCGACTTGG
TGGTTGCATT CGTCATCTTA TTTATTTTTT ACTAATATCT TCTACTAATA TTCTGGATAA
TAAAAGTTAA TTCGCTTC
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| Protein sequence | MGLTSLATRW VVQLLLIGAH IAGLLLFFRG FFPSKVVLPG FGNFHNGASP FAERGKPQFD
KVIVMVVDAM RADFCYSQEH SHMTFLHELI NDGKAVPFTG FSHPPTVTLP RLKGITTGGT
PNFLDAILNV ADDKDQSQGL LSQDSWIYQY KKLGKSINFY GDDTWLKLFP GQFDKVEGTN
SFFVSDFTEV DLNVTRHLTE ELDRQQSRWD GLILHYLGLD HIGHKGGPNS VFMKPKQEEM
DSVLRRLYEY AETSQKRKES VLIVLMGDHG MNEIGNHGAS SVGETNAALL FISPKFNHKN
EQKAPLADSP DYSYYSSVSQ IDLVPTLAGL LNFPIPKNSL GIIIRELLEL WPSEKQKLAI
LMENCNQFMD LFSAKHDKLE HLDVWEKWSQ LQDSKVVSSI DDHFDFLLKV QDILASAATN
YNYDDMWTGF ALTVVSAVVT LITFNSYFLK QSENSFKLAQ YFQLFAIVYS LHFHGSSLIE
EEHQLWWFFT VLSFVYLAFT CFVLNRTNAF YWSLIFIGIR IIRSWNNSGQ KYSSSNTISY
YLLNENSDLL WALNLITYLV TTVAIFAQGR IVECLSILND SQGRNSDFQQ AGNLLSFVLI
FVASSISFLF KVCQYYNDGY DVPGWLNFLF KWVLSSYDVD IKSLNDPDFK FQLQDLNILI
ARLSGYFILG ILGLRIVAGK IKKLSSGIIT DMINISTLYL LQQSKYENIP MFLTFMLIKF
AFTKLVVSVQ VKGVDIDQLI AICAIFTICM QNLSFFCLGN TNLLATVDLS NAYNGIKSYD
VIPVGVLTFL SNFVAPVYWS LSGLQIFFEP SRVLFNSELA SKDLINFLFL RKSVFLVKSN
VTLVFYAIAA VNLLGSCINL RFHLFIWTVF SPKLLYFASW SVLVNFFVDL VVAFVILFIF
Y
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