| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_86322 |
|---|
| Symbol | CKA2 |
|---|
| ID | 4851262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | - |
|---|
| Start bp | 1339461 |
|---|
| End bp | 1340540 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | |
|---|
| GC content | 45% |
|---|
| IMG OID | 640392970 |
|---|
| Product | Casein kinase II, alpha subunit Cell cycle control, cell division, chromosome partitioning |
|---|
| Protein accession | XP_001387905 |
|---|
| Protein GI | 126274248 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.279312 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATTTTGCTTC CACCATGAGC GTCAGCACCC GTGTCTACTC GGTGGCCCGT GTCTACGCAG
ATGTCAACTC CAACAAACCA TCGGAATATT GGGACTACGA GAACCACAAG ATCTCGTGGG
GCAACATCAA GAACTACGAG ATCATCTCGA AGATCGGTAG GGGCAAATAC TCAGAAGTGT
TCCAGGGGGT GAACGTGCTA AACGACGAGC CCTGTGTTAT AAAAGTGTTG AAGCCAGTTA
AGCTAAAGAA GATCTTTCGA GAAGTCAAGA TTCTCCAGAA CCTCACAGGG GGTCCAAACG
TCATTGGCTT GTTGGACATC GTTCGTGACG AGCAGAGCAA GATCCCAGCT TTGATCTTTG
AAAAGGTGTC CAATGTCGAT TTCCGGGTCT TATATCCCAA ATTCACCATA TCCGATATCC
AGTACTACTT CACTCAGTTG TTAATAGCAT TAGATTACTC GCATTCTATG GGCATTATCC
ATCGAGACGT CAAGCCCCAG AACATCATGA TTGACCCAAT GAACAAAAAA TTACGTTTGA
TCGACTGGGG GTTGGCCGAG TTCTACCACA TGGGAATGGA TTATAATGTC CGTGTAGCGC
TGAGATACCA CAAGGGCCCA GAGCTCTTGA TCAATCTCCA ACAGTACGAC TACTCGTTAG
ACTTGTGGTC TGTAGGCTGT ATGCTCGCAG CAATAATATT CAAGAAGGAG CCGTTCTTCC
GTGGTGACTC CAACAACGAC CAGTTGGTCC AAATCGCAAA AGTATTGGGA ACAGAAGACT
TGATGAATTA CGTCTCCAAA TATGGCTTGA AACTCTCGCT GGACTACGAC GACATCCTCG
GAAATTACCC CAGAAAGCCA TGGAAGTCGT TCATCAATAA CGAAAACAAG CACTTAATCT
CTGATGAAGT CGTTGATTTG ATCGATAAAT TGTTGACGTT CGACCACCAG TTGCGCCCAA
CAGCAGAGGA AGCCATGGAC CATCCCTTCT TCAAGTTATA GACTAGCTCC TCGTTCTGCA
TTCTTGTAAT ATACTAATAT AATCATCTCT TGCAAGTAAA GTAGTATTCT ACGATGTAGT
|
|---|
| Protein sequence | MSVSTRVYSV ARVYADVNSN KPSEYWDYEN HKISWGNIKN YEIISKIGRG KYSEVFQGVN
VLNDEPCVIK VLKPVKLKKI FREVKILQNL TGGPNVIGLL DIVRDEQSKI PALIFEKVSN
VDFRVLYPKF TISDIQYYFT QLLIALDYSH SMGIIHRDVK PQNIMIDPMN KKLRLIDWGL
AEFYHMGMDY NVRVALRYHK GPELLINLQQ YDYSLDLWSV GCMLAAIIFK KEPFFRGDSN
NDQLVQIAKV LGTEDLMNYV SKYGLKLSLD YDDILGNYPR KPWKSFINNE NKHLISDEVV
DLIDKLLTFD HQLRPTAEEA MDHPFFKL
|
|---|
| |