Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_86147 |
Symbol | CYT1 |
ID | 4851258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 1330996 |
End bp | 1332529 |
Gene Length | 1534 bp |
Protein Length | 288 aa |
Translation table | |
GC content | 43% |
IMG OID | 640392966 |
Product | cytochrome c1 |
Protein accession | XP_001387903 |
Protein GI | 126274244 |
COG category | [C] Energy production and conversion |
COG ID | [COG2857] Cytochrome c1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.216039 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CAGAGTAACG TGTCTGAACG TCTCAGAGTA GAGAATACTA AGATTAGAAC TTGTTAATAC TGTTCCCACA TTGTCGAATA AAGTATTAAT ATAGACTGAA TATCGACTAG TGAATTGAAA ATTTGTTCAT ATTCAATATC ACCAATTTCA TTCCCATACT ACTATCATTG AACACCATCA TTGGATACTA GTATAAATAG CAACCACGAC AGTATTGCTA TCTTCTCATA TCAGTAGTTC ATTATCGCTA TCCTTCGGAT CACTGATTCT AGCCAGTACA TCAATTGGTT ATTCACATTT CCATCTTCTT CATTTGTTTG TTGTTTCGTA ACTCGTCATA ATGTTCTCGT CTTCCTTGAG AACCCTTAAC CGCTCTGCCG TGCAGAAAAT CATTGCCGGC TCTGTCGGTG TCACCGGTTT GACTGCCTCG TATTTGTTGT ACCAAGACTC CATGACAGCT CAAGCCATGA CTGCGGCTGA ACACGGCTTG CACGCTCCAG CTTACGGCTG GTCCCACAAC GGTATGTTGG ATGCCTTTGA CCACGCCTCC ATCAGAAGAG GCTACCAGGT CTACAGAGAG GTCTGTGCTG CCTGTCACTC GCTTGACAGA ATCGCCTGGA GAAACTTGGT CGCTGTATCT CACACTTCTT CCGAAGCTAA GGCATTTGCT GAAGAATTGG AATACGACGA CGAACCAGAT GACGAAGGTA ACCCAAGAAA GAGACCAGGT AAGTTGGCCG ACTACCTCCC TGCACCTTAC GCCAACGAAC AAGCTGCCAG AGCCGCCAAC CAAGGTGCTT TGCCTCCAGA CTTGTCGTTG ATTGTCAAGG CCAGACACGG AGGATGTGAC TACATCTTTT CGCTTTTGAC CGGTTACCCA GAAGAGCCTC CAGCCGGTGT AGTCTTGCCT CCTGGTGCTA ACTACAACCC TTACTTCCCT GGTGGATCCA TTGCTATGGG TAGAGTGTTA TTCGATGGTT TGGTTGAATA CGAAGACGGA ACTCCAGCCA CCACCTCACA AATGGCCAAG GATGTCGTCA CTTTCTTGAA CTGGGCTTCG GAACCAGAAC ACGACGACAG AAAGAGATGG GGTTTGAAGG CTATTGTCAT CGTTTCATCC TTGTACTTAC TTTCTATCTG GGTTAAGAGA TTCAAATGGC AACCAATCAA GAACAGAAAG ATCAGATTTG ACCCTCCAAA GAAGTAATCT CTATCAATAA AAACCATTCA CCTACAAATA GCCAAAAGCC GATGGTCTAT ATAGAACGAT CCATCTCATA AAAACTGCTG TGAACTACCA AAAGTTGTAA ATAGCTGCCA GACATCGAAA GGCAGACGTG GACAAGAAGA TTTGACTGTT AATATCCCCA AGTTGAATAC AAGGCATAAA CTTGTAAGTT CACATGGCAG TTCTTTAATT GTTGGTGTCG TCTAGCATCG GCTGTCTGTG TTGTTTGAGA CTCATTTTAC ATATTCTATT TATCTTTATA TCTGCTTTAT ATTCACAGCA TTATATGTTA AAACAATTTG TGTT
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Protein sequence | MFSSSLRTLN RSAVQKIIAG SVGVTGLTAS YLLYQDSMTA QAMTAAEHGL HAPAYGWSHN GMLDAFDHAS IRRGYQVYRE VCAACHSLDR IAWRNLVAVS HTSSEAKAFA EELEYDDEPD DEGNPRKRPG KLADYLPAPY ANEQAARAAN QGALPPDLSL IVKARHGGCD YIFSLLTGYP EEPPAGVVLP PGANYNPYFP GGSIAMGRVL FDGLVEYEDG TPATTSQMAK DVVTFLNWAS EPEHDDRKRW GLKAIVIVSS LYLLSIWVKR FKWQPIKNRK IRFDPPKK
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