Gene PICST_86147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_86147 
SymbolCYT1 
ID4851258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1330996 
End bp1332529 
Gene Length1534 bp 
Protein Length288 aa 
Translation table 
GC content43% 
IMG OID640392966 
Productcytochrome c1 
Protein accessionXP_001387903 
Protein GI126274244 
COG category[C] Energy production and conversion 
COG ID[COG2857] Cytochrome c1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.216039 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CAGAGTAACG TGTCTGAACG TCTCAGAGTA GAGAATACTA AGATTAGAAC TTGTTAATAC 
TGTTCCCACA TTGTCGAATA AAGTATTAAT ATAGACTGAA TATCGACTAG TGAATTGAAA
ATTTGTTCAT ATTCAATATC ACCAATTTCA TTCCCATACT ACTATCATTG AACACCATCA
TTGGATACTA GTATAAATAG CAACCACGAC AGTATTGCTA TCTTCTCATA TCAGTAGTTC
ATTATCGCTA TCCTTCGGAT CACTGATTCT AGCCAGTACA TCAATTGGTT ATTCACATTT
CCATCTTCTT CATTTGTTTG TTGTTTCGTA ACTCGTCATA ATGTTCTCGT CTTCCTTGAG
AACCCTTAAC CGCTCTGCCG TGCAGAAAAT CATTGCCGGC TCTGTCGGTG TCACCGGTTT
GACTGCCTCG TATTTGTTGT ACCAAGACTC CATGACAGCT CAAGCCATGA CTGCGGCTGA
ACACGGCTTG CACGCTCCAG CTTACGGCTG GTCCCACAAC GGTATGTTGG ATGCCTTTGA
CCACGCCTCC ATCAGAAGAG GCTACCAGGT CTACAGAGAG GTCTGTGCTG CCTGTCACTC
GCTTGACAGA ATCGCCTGGA GAAACTTGGT CGCTGTATCT CACACTTCTT CCGAAGCTAA
GGCATTTGCT GAAGAATTGG AATACGACGA CGAACCAGAT GACGAAGGTA ACCCAAGAAA
GAGACCAGGT AAGTTGGCCG ACTACCTCCC TGCACCTTAC GCCAACGAAC AAGCTGCCAG
AGCCGCCAAC CAAGGTGCTT TGCCTCCAGA CTTGTCGTTG ATTGTCAAGG CCAGACACGG
AGGATGTGAC TACATCTTTT CGCTTTTGAC CGGTTACCCA GAAGAGCCTC CAGCCGGTGT
AGTCTTGCCT CCTGGTGCTA ACTACAACCC TTACTTCCCT GGTGGATCCA TTGCTATGGG
TAGAGTGTTA TTCGATGGTT TGGTTGAATA CGAAGACGGA ACTCCAGCCA CCACCTCACA
AATGGCCAAG GATGTCGTCA CTTTCTTGAA CTGGGCTTCG GAACCAGAAC ACGACGACAG
AAAGAGATGG GGTTTGAAGG CTATTGTCAT CGTTTCATCC TTGTACTTAC TTTCTATCTG
GGTTAAGAGA TTCAAATGGC AACCAATCAA GAACAGAAAG ATCAGATTTG ACCCTCCAAA
GAAGTAATCT CTATCAATAA AAACCATTCA CCTACAAATA GCCAAAAGCC GATGGTCTAT
ATAGAACGAT CCATCTCATA AAAACTGCTG TGAACTACCA AAAGTTGTAA ATAGCTGCCA
GACATCGAAA GGCAGACGTG GACAAGAAGA TTTGACTGTT AATATCCCCA AGTTGAATAC
AAGGCATAAA CTTGTAAGTT CACATGGCAG TTCTTTAATT GTTGGTGTCG TCTAGCATCG
GCTGTCTGTG TTGTTTGAGA CTCATTTTAC ATATTCTATT TATCTTTATA TCTGCTTTAT
ATTCACAGCA TTATATGTTA AAACAATTTG TGTT
 
Protein sequence
MFSSSLRTLN RSAVQKIIAG SVGVTGLTAS YLLYQDSMTA QAMTAAEHGL HAPAYGWSHN 
GMLDAFDHAS IRRGYQVYRE VCAACHSLDR IAWRNLVAVS HTSSEAKAFA EELEYDDEPD
DEGNPRKRPG KLADYLPAPY ANEQAARAAN QGALPPDLSL IVKARHGGCD YIFSLLTGYP
EEPPAGVVLP PGANYNPYFP GGSIAMGRVL FDGLVEYEDG TPATTSQMAK DVVTFLNWAS
EPEHDDRKRW GLKAIVIVSS LYLLSIWVKR FKWQPIKNRK IRFDPPKK