| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_86133 |
|---|
| Symbol | NMA1 |
|---|
| ID | 4851560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 2139268 |
|---|
| End bp | 2141106 |
|---|
| Gene Length | 1839 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 640393268 |
|---|
| Product | NAD(+) salvage pathway |
|---|
| Protein accession | XP_001387653 |
|---|
| Protein GI | 126274858 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1057] Nicotinic acid mononucleotide adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR00482] nicotinate (nicotinamide) nucleotide adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.306432 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.206932 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CTGTTCGTTT CCCGTCTACG CAACTACCTG GACATAAATA GCGACCCCTC GTCCCTACCG
CCGTTCCCTC TACCCAGACT TTGTCTTAGT GGAGTCGCAC GAAAAATTTC TCCGGCGTTT
AAATCTCTGA GTCAACTGAG TGGGGACGAA AGCTGAATCG CTAATATAAA TCACCACTAC
ATTGCGTTTC GCTGTTGGCT GGAGATAGCC TTACAAATAG AAAGTGTTGA ACCGTCTTAT
TTACATACGC CTCCGTCCGG TTTCTTTCTT GCACTTCTCT TCTCCTTCTC CTATACTTTC
TATAGTCTGC TACAGCTCCT GTTCGTACGC TGTACCTGAC GTAACTGTCT GCTACTGCAA
CTGGCGCACT TCAGCCTTCC GCTATCTGTG GCTCTTTATC TTCGACCGAT CTCGAGATTG
ATTTTTTTTC TCGGATTTTC ACTCACTGTG ATTTTTGATT TTTAATTAAT TTTCTCACCG
AATAACCATT TTTCCAGCTG TTTGTTTGTT CCAGCCACAA TTTCCATTTA ATTCCTTCCA
TATTCCCTCA ATTGTCACAC TGCCCCAGCA CATTTGCCCA GGATGGACCC AACACACGAT
CCCAACTTCA CACCGCCCTC GTTGAACAGA AACATCGAGC CCCCGGCTCC GTCTTCTGAG
ATTCCCCTTA ACATGCCTAT CCAGCCGTTT GTATTAGCTG ATTTAGGCGG AGCTGTAGAT
GCTCCTCCAC CACACCCACC CAAAAACAGA ACCAAGCACG CTGTAGTTGA CGAGTTTGGC
AATTACCACT CAAAGATCCC GCGGATCCAG ACGGATTTGG TGAACTCTTC TTCTGACGAA
GATGTCACTG ACTCGCAATC GACATCGAAA AACGACATAG ATGTAGAACT AGAAAGCGTA
GACAATTTGG ATGATGAAAA GCCTTCTGAC TCTAGGTCTG GCGCCAACGG AAGTGCTATC
GAGCAAACTG TTCCCATTTT TCCACCAACT GTGCTGGTGA AATCAAGCCA AATCGCAGAC
TTAGAAGAGG TTCCCCACGG CATCCAGAGA CTGGCTACTA CTTTGGACCA GTACCAGTTT
CCCACGCATA GACTTGCCAC AACGTTGCTG GACGACTCCA AGTACCCGTT GGTAATAGTT
GCCTGTGGCT CGTTTTCTCC CATCACCTAC TTGCACTTGC GTATGTTTGA GATGGCTCTA
GATGCGATTA CTGAACAGAC CCGTTTTGAA GTCATAGGCG GCTTTTATTC GCCGGTATCT
TCTAATTACA AGAAACAAGG TTTGGCTCCT GCCCACCACC GTGTGAGAAT GTGCGAGTTG
GCTTGTGAAA GAACCTCGTC GTGGCTCATG GTGGATGCGT GGGAATCGCT ACAGCCACGC
TACACCAGAA CAGCTTTGGT GTTGGACCAC TTCAACGAAG AAATAAATAT CAAAAGAGGC
GGAATCAAGA ATCGAAACGG AGAAAGCAGA GGTGTCAAAA TAATGCTCTT AGCCGGTGGT
GATTTGATCG AATCGATGGG CGAACCAGAT GTATGGGCAG ACCAGGATTT ACATCATATC
TTGGGCAAGT ACGGCTGTCT AATTGTCGAA AGAACCGGTT CTGATGTCAG AAGCTTCCTT
TTGAGCCACG ACATCATGTA CGAACACAGA CGAAATGTAT TGGTAATCAA ACAGTTGATC
TACAACGACA TTTCCTCAAC TAAAATCAGA CTCTTTATCA GAAGGGGCAT GTCCGTACAG
TACCTTTTGC CGAACTCAGT CATCCGCTAC ATACAGCAGC ACAAGTTGTA CTACGACTCC
GAACCAGTCA AGGAAGTCAT GTCTGAAAAC GCTGACTAA
|
|---|
| Protein sequence | MDPTHDPNFT PPSLNRNIEP PAPSSEIPLN MPIQPFVLAD LGGAVDAPPP HPPKNRTKHA
VVDEFGNYHS KIPRIQTDLV NSSSDEDVTD SQSTSKNDID QTVPIFPPTV LVKSSQIADL
EEVPHGIQRL ATTLDQYQFP THRLATTLLD DSKYPLVIVA CGSFSPITYL HLRMFEMALD
AITEQTRFEV IGGFYSPVSS NYKKQGLAPA HHRVRMCELA CERTSSWLMV DAWESLQPRY
TRTALVLDHF NEEINIKRGG IKNRNGESRG VKIMLLAGGD LIESMGEPDV WADQDLHHIL
GKYGCLIVER TGSDVRSFLL SHDIMYEHRR NVLVIKQLIY NDISSTKIRL FIRRGMSVQY
LLPNSVIRYI QQHKLYYDSE PVKEVMSENA D
|
|---|
| |