Gene PICST_86084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_86084 
Symbol 
ID4851214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1217769 
End bp1218868 
Gene Length1100 bp 
Protein Length333 aa 
Translation table 
GC content39% 
IMG OID640392922 
Productmethyltransferase 
Protein accessionXP_001387464 
Protein GI126274200 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0255585 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATCGC AAAATCAGTA CAATAATTCA CGGATACTAG CTAAATGCCT GAACAAGAAG 
CTCATTCTAT TGCTATCAAC TCGTTCAATT TGAACCACCA GGATTACGAC ACTTTCCGTC
CTTCTTTCAA AGAAGAACTT GTGAACCCAT TCTTGGTTCA ATTGGGCTTA GGTGAGCATG
ACAGTGCTAC CAACAAATTT ACTTTCGACA CAGAAAAGAC TATCGTAGAG ATCGCAGCTG
GAACTGGTAA ATTCACCAGA AATTTGGTTT CTAACGGCTG GGATAATTCC AATGCTAAAA
ACACAAATAA CTTGATTATT GTAGAGCCAA GTAAGGGAAT GTTGGAATCG TTTAAGAAGA
ATTTTCCTCA GATCAAGAAG GAAAATATTC ACCAGGCTGC TTCGTACCAG CTTCCTCTTG
CCGATAATTC TGCTGATGCG GTAATTATTG CTCAGGGGTT CCATTGGTTC AGTGACTCTG
CCAGCTTGAA GGAAATTGCC AGGGTTCTTA AACCAACTGG TAAGCTTGGT TTGATTTGGA
ATCTCGACTA TGCCTCAAAG AGTCAAAATA CACCTATAGA AAAATCAAAG TTCTACGATG
GTGGGTCTTA CTATTACAAA GATATTGATT TTTCAAAATA CAAGACAGTC GAGGAATTAT
TGTCAGATTA CGTCGCCAAC CAACCTTGGT CCAAGAAAGT CACTGAGCTC ATCTACCAGT
ATGATCTTGG AGTTCCTCAA TACCGTCATG GAAAGTGGAG AGATATCCTT GAAAAGGGAG
GCAATGAATA CTTCTCTCCT ATCGAAGTTG AATTATTTGT GTTGTACGAC AAGTTGATTG
CTGCCGAGGA TGTGTACAAG TACTGGGAAA CCAGATCGTA TATCACTGAA TTGAGTGAGA
GACAGAAGGC TAAAATTAAA GAAGATGTGG AAGCTATCTT GAAAGATTAC GCTGGTAAAG
CTAGTAGACC ATTTTCTGAT GATGGTGACG AAAGACTTTT GAAGCCAATG GGAACTCATG
CCATTGTGTT AGAAGTAAAA AAATAGGATA TATCTTACTT AGATCATTAG TAAAACCTGT
TAGTAAATCA TTAGTCCCAT
 
Protein sequence
MPEQEAHSIA INSFNLNHQD YDTFRPSFKE ELVNPFLVQL GLGEHDSATN KFTFDTEKTI 
VEIAAGTGKF TRNLVSNGWD NSNAKNTNNL IIVEPSKGML ESFKKNFPQI KKENIHQAAS
YQLPLADNSA DAVIIAQGFH WFSDSASLKE IARVLKPTGK LGLIWNLDYA SKSQNTPIEK
SKFYDGGSYY YKDIDFSKYK TVEELLSDYV ANQPWSKKVT ELIYQYDLGV PQYRHGKWRD
ILEKGGNEYF SPIEVELFVL YDKLIAAEDV YKYWETRSYI TELSERQKAK IKEDVEAILK
DYAGKASRPF SDDGDERLLK PMGTHAIVLE VKK