| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_85971 |
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| Symbol | SPT16 |
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| ID | 4850866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 272025 |
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| End bp | 275289 |
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| Gene Length | 3265 bp |
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| Protein Length | 1026 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640392574 |
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| Product | global regulator of transcription |
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| Protein accession | XP_001387291 |
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| Protein GI | 126273777 |
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| COG category | [B] Chromatin structure and dynamics
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG5406] Nucleosome binding factor SPN, SPT16 subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATCGCGTGTT ATTTGGGACG GAAAGCACTC TGAAACATAC GCGGGAGATA TCAGAAGCAG
ATAAATCACC ATGAGTCGTT CCTCTGATGT CCACATCGAC GCCTCGTCGT TCCACAAGAG
ACTTTCGCTC ATCCAAAAGT TCATGGTGCA AGAAAAAGCC ACCGTTCCCG GCCAGCTTGT
CATCATCGTA GGAACGCGTG ATGAAGAAAA CACATACAAG AAGCTGACAG TGTTGCAGAA
CTGGTTGTTG GGGTATGAGT TCGTGCAGAC GGTGATGTAT ATCACGAGCG AGAAGCTCAT
TGTAGTCACT TCCGAAGGTA AGGCTAAGTA TTTGAAGCAC TTGACCACGA AGCCGACCGC
CAACTCGAGT GAAGTTGAAG TTTGGTCACG CACAAAAGAT GTCGAACAGC AGAAGAAGCT
TTTCACAGAT TTGGTGGCGC AATTGCAAAA GAATGGTCCA GAATACGGGT CTGTGATCAA
GGATCAGTAC AAGGGCAAAT TTGTAGATGA GTGGAAAGCC GCTCTTTCCT CTGCCCCTGA
GCTTCAAATT AAGGATATCA CTCTTCTACT TTCACGTGCC ATGGAATTGA AAGATTCTGA
GGAGTTTTCC AATACGAAAG TGGCTGCAAA TGCTTCCGTA GTGATGATGG ATACATTTGC
TAACGAGATG ATGACAGTTG TAGATGAAGA AAAGAAGATC ACCAACGCCC GTTTCACAGA
TGGAATCGAA GACAAAATTG ATGACGAGAA GTGGATCGTG AAGTCGGCTC TTGGGAAAAA
GCTCTTGAAG TCTGACAGGG ACTTTGATCA CGAATTGCTT GAATGGTGTT ACTCACCAAT
TATTCAGAGC GGAGGCAAGT TCGACTTGAA ACCCAGCGCT GTTTCGACCG AAGATTCGTT
GGTGGGTGAC GGTGTGATTT TGTCGTCAAT TGGATTACGT TACAAGTCGT ATTGCTCAAA
TGTCGGTAGA ACTTTCTTGA TTGATCCCAC TTCCGAGATC GAGGCTAACT ACGACTTCTT
GCTTAAGTTG CAGGAGCACA TCACCAAGAA CTTGTTAAAG GACGGAAATC TCGCCAAAGA
GGTCTATGAA GGAGCCATAG CATTCATCAA AGCCGAAAAG CCTCAACTTG TAGAACACTT
CACCAAAAAC GTAGGCTGGT TGACTGGTAT TGAATTCAGA GATTCGACCT TCATTTTAAA
TGCTAAGAAC GAGAGAAAGT TGACCAATGG CCAGATCATT TCTCTTGCTA TTGGGTTCAC
GAATTTGGTC AACGAAAAGA CAAAGAACCC TAAGTTGAAG AACTATGCAC TTTTGTTAAC
AGACACCTAC AAAGTTAGTG AATCTGAGCC AATCTTGCTT ACTGAATCGC CCAAGCAACG
TTCAGAGATC TCATTCTACT TCAAAGACGA TGACGTAACC AAGAATGAGG AAAAGAAGTT
GAAATCGGAA AAGAATATCA AGATCGAAAA GAAATTAGCT GTCAATGAGG CCAACTCGAA
GATCTTGAAA TCGAAACTAA GACATGAATC CAGCGGAGCC GACGATGTCA ATGCCGAGAA
GGTCCGTCAA GAATTACAGA GCAAGTTACA TGAGAAAAGA CAACAGGAAG GTTTGGCCAG
GTTCTCCAAA GCTGATGCTA CTGATAGTTC TGACTTTAAG CCAGTATTTA AGAAATACGA
ATCATATGTC AGAGAATCGA TGATCCCAGC TAGTGTTCGT GATTTGAAGA TCCATGTCGA
TCCTAAGAAC CAGACCATTA TCTTGCCGAT CTGTGGACGT CCTGTCCCAT TCCATATCAA
TTCGTTCAAG AACGGCTCTC AGAACGAAGA AGGAGACTAC ACATATTTAA GATTGAATTT
TAACTCCCCT GGTGCTGGAG GCAATGCCTC AAGAAGAACT GAATTACCCT ATGAAGATTC
ACCTGATAAC TCGTTCTTGA GATCGATAAC GTTGAGATCT CGTGATCGCC AGAGAATGGT
CGATGTGTTC AAGTTGATCC AGGAAATGAA GAAGGAATCG GTCAAGAGAG AACTGGAAAG
AAAGCAGATG GCCGACGTCA TTAGCCAGGC CAATTTGATC GAGTTAAAGG GCTCCAGAAT
GAAGAAGTTG GACAATGTTT TCATCAGACC ACAGCCAGAC ACGAAAAAGA TCGGTGGAAT
CTTGCAGATC CACGAAAACG GTTTGAGATA CCAGTCTTCA TTCAAAAACG ACCAGAAAGT
TGATCTTCTT TTTAGCAACA TCAAGCACTT GTTCTTTCAG CCTTGTAAAG ACGAGTTGAT
TGTGTTGATT CATTGCCACT TGAAGAGTCC AATCATGATT GGTAAGAAGA AAACTTTTGA
TGTTCAGTTC TACCGTGAGG CCAGTGATAT TGCCTTCGAT GAAACTGGAG GTCGTAAAAG
AAGATACAGA TACGGTGACG AAGATGAATT ACAACAGGAA CAAGAAGAAA GAAGAAGAAA
GGCACTTTTG GATAAGGAAT TCAAGGCTTT TGCCGAACTC ATTGCTGGCT CCTCCAATCA
TGTAGTCGAC TTGGATATTC CGTTCCGTGA ATTGGGATTC CAGGGTGTTC CCTTCAGGTC
ATCGGTGTTG TGTATGCCAA CTCGTGACTG TTTAGTTCAG TTGATTGATC CGCCCTACTT
AGTTGTCACC TTGGAAGAAA TCGAATTGGC CCACTTGGAA AGAGTGCAAT TTGGTTTGAA
GAATTTCGAT ATGGTTTTTG TCTTCAAGGA CTTCTCTAAA CCAGTAGTCC ATGTAAATAC
TATTCCTATG GAACTTTTGG AAGATGTGAA GAACTGGTTA ACTGATGTTG ATATTCCATT
GAGTGAAGGT CAGATGAACT TGAACTGGGG AGCCATTTTG AAGACTGTGC AAGCTGACCC
ATATCAATTC TTTGCTGACG GCGGTTGGAG TATCTTGACT GGTGTAGGAG ATTCTGACGA
AGAAGATGAA GAAGATGAAG AGTCTGAGTT CGAGGCATCT GATGACGATC CAAGTGACGA
AGAAGTCGAA AGTGAAGAAG CAAGTGAAGA CAACTACAGC AGTGGAGGCT CTGAAAGTGA
AGGCAGTGGT GATGAAGAAA GTGAAGGTGA CGATTGGGAT GAAATGGAGA AGAAGGCTGC
GAAGGAAGAC AGCAGACGTT ACAGAGATTA GGTAACGTCA TAAGAGTGTA TCATTAGTAG
TGTTGCTGAC AATAAATGAT TTCTGTTCAT GAAGAATTAA ATAGAATTAG TATTTTATTT
ATGATAATGT CTGTTAGTAA ACTTC
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| Protein sequence | MSRSSDVHID ASSFHKRLSL IQKFMVQEKA TVPGQLVIIV GTRDEENTYK KLTVLQNWLL
GYEFVQTVMY ITSEKLIVVT SEGKAKYLKH LTTKPTANSS EVEVWSRTKD VEQQKKLFTD
LVAQLQKNGP EYGSVIKDQY KGKFVDEWKA ALSSAPELQI KDITLLLSRA MELKDSEEFS
NTKVAANASV VMMDTFANEM MTVVDEEKKI TNARFTDGIE DKIDDEKWIV KSALGKKLLK
SDRDFDHELL EWCYSPIIQS GGKFDLKPSA VSTEDSLVGD GVILSSIGLR YKSYCSNVGR
TFLIDPTSEI EANYDFLLKL QEHITKNLLK DGNLAKEVYE GAIAFIKAEK PQLVEHFTKN
VGWLTGIEFR DSTFILNAKN ERKLTNGQII SLAIGFTNLV NEKTKNPKLK NYALLLTDTY
KVSESEPILL TESPKQRSEI SFYFKDDDVT KNEEKKLKSE KNIKIEKKLA VNEANSKILK
SKLRHESSGA DDVNAEKVRQ ELQSKLHEKR QQEGLARFSK ADATDSSDFK PVFKKYESYV
RESMIPASVR DLKIHVDPKN QTIILPICGR PVPFHINSFK NGSQNEEGDY TYLRLNFNSP
GAGGNASRRT ELPYEDSPDN SFLRSITLRS RDRQRMVDVF KLIQEMKKES VKRELERKQM
ADVISQANLI ELKGSRMKKL DNVFIRPQPD TKKIGGILQI HENGLRYQSS FKNDQKVDLL
FSNIKHLFFQ PCKDELIVLI HCHLKSPIMI GKKKTFDVQF YREASDIAFD ETGGRKRRYR
YGDEDELQQE QEERRRKALL DKEFKAFAEL IAGSSNHVVD LDIPFRELGF QGVPFRSSVL
CMPTRDCLVQ LIDPPYLVVT LEEIELAHLE RVQFGLKNFD MVFVFKDFSK PVVHVNTIPM
ELLEDVKNWL TDVDIPLSEG QMNLNWGAIL KTVQADPYQF FADGGWSILT GVGDSDEEDE
EDEESEFEAS DDDPSDEEVE SEEASEDNYS SGGSESEGSG DEESEGDDWD EMEKKAAKED
SRRYRD
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