| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_85888 |
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| Symbol | SSN7 |
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| ID | 4850816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 132786 |
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| End bp | 135301 |
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| Gene Length | 2516 bp |
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| Protein Length | 669 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 640392524 |
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| Product | transcription factor which mediates glucose repression |
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| Protein accession | XP_001387682 |
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| Protein GI | 126273570 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AGTTTTTGTT TTTGTTTTGA ATTCACATTT CATATTAGAG CTCACAACTA CGTCATCTCA
ACTGCAACCC AGCGTATTCA CTAGCTCTGC GAGATAGATC CTTCAAGTGT CACGGAAAAA
GAACTGCTGA CTATAAAAGA ATCCTCGCCT ATTTGTTCGC AAGTCCATAA TTTTTTTATC
AGAACTTTCA TCTAAGAATT TTCATCTTAC AGTGGCCCTC ATATCATAGA TAAGTAACCA
CCTGTTCATC CACTAGCTCT AATTAACTTA CCGTTGTCTA TACCAGCACA ACATTAACAT
TTTCTACCGC TATACCTTTC CACCTGTTCC AGCAAACACT AACAGTGCAA CCAGCTCTTC
CACTTTTTTT ACACTAAAGC CAGAAGATAC TCGAGGATAT ACAATCAACT TTCCTTTGTA
TAATCACATT TTCATCTCAT AAATCAATAG AATGTACGCT GCCAAAAGAC CCTCCCAGGA
GCTTTCGCCT GGGTCTAAAC GCCAGCGACT CCACGACAAG CTGCTCTCTG ACTACGCATC
ATCAGCTACA GAAACGTGGA TAGCCTGTGG GAACTGTGCC AATACTTTAG GTCTCGTTGT
TCCCGCTATC AAGTCGTTTG AAAACGCTGT TGTGCATGAT CCTTCCAATG CTGCTGCCCT
CTGTGGATTG GCTTCTTCGC TTAGACTTAA CGATATCAGC CTCAACGAAA CGATAGGAAC
CCAAAGTGCC ATCGACAAAT TGAATAAGCT GTTAGAACTG TTTCCCTCTT TGCTCAAGCA
GCCAGCAGTT TTTAAGGAGT TGGCAGAATG TTACTTACTC ATTGGTCTCA ACGACCAGGC
TCACCAGGCT ATCCAGACGG CTTTGCAACT TGCTGAGACC GATGCTTCGC TTTGGCTCTT
GCTGGCTCAA ACATTAATAC GTGTCGGCGC CAGAAGTCAT GCTGCCGGTT CGTTGACCCA
CTGTTTGTCG CTTTTACCAG ACTCAATCCA TCAGTTTTCT ACTGCTGATA TCGAAACTGC
CAGAGCTGCT CATGCTGAAT TGGCAGCTAT TGCTGCTGCT GATGGAAGCA TCGAGTTGTC
AATTGCAGAA TTGACTGCAA CTCTTTCTCT TCCACCTCCT CCATTGTCGA GAATCGACGA
ACATATTGCT CTCTGGTGTG CTTTATCAAC AGCCAAAGAA AGAGCTAACG ATATCGCTGG
AGCCATCCAG GCATGTGAGC AGTCAGAAAA GGCCGTTGGA ATGTCACCAC GTATCTTGAT
GACTCACTCG TACTTGCTTC TCTTCAGCAA CGACAGAAAT AATGCCGAAA CGGCCATTAA
CTTACTTTCT AAAATCATTG ACTTGGAAAA GGAAAAGGAA TCAGAACAGC CCAAAAACGA
CGGTGACTTC TTACCGTGGT ACTTGCTCGG AAAAGCGTAT TCTCTCGTAG ACCAACCTCG
GTTGGCATAT GATTCTTACC AGGTTGCTTT ACGTAGAGCC TCGAACTCGC CCATCACGTG
GCTCGCTGTA GGGAAGTTGT ATTTGGAGTT GAAGCAGTTG CCCGATGCCT TGGCAGCCTA
TTCGCAGGCG TTACGGTTGC AAATCGATGA AAGCTCACCC GGAACTGCTA CAGCTTGGGA
CGGTTTGAGT TGTGTCTATG AAAGATGCGA CGACCAGCTT ATGGATGCCT CTGATGCTTG
TGCCAGGTCT GCCTCTTGTT TCAAGGTGAT AGGTGACTTG AAGTCTGCCG CCTTCTTTGA
AGAAAGAGCT GAACTTTTGG CTAAAGTATC GAAAAAAGAA GCTCCTGTAC CAGAATTGAG
AGATCCTCCA GATGTTCCCA GCTTCTTGTT GAGAGACCTT GTAGCCTTGT TGCCTTCTGA
GAGAATTGCC TTTATACAAG GTCCTCAACA ACAAGAGCAA ACTCAACAAC CTCAACAACA
GCAACAACAG CAACAACAGG GTACACCTTT ACAACAGACT CCAAATCCAC AGCATCACCA
ACCTCAACAC AGTCCTGCTA TTTCCATGAT TCAACTGCAG CAAACTCCAC AACCACCTCA
GGCTCATTAT CCTCAACCTC AGCAACAACA GCCTCAACGT ACTCCTCAGC AACATCTTTT
CCATCAGGGT TTCAAACAGG AACAAAAGTC GCCCAGACAG CAGCAGATTC CTCCTCAGTT
GCCTCCTCCA CAGATTCAGC AAGTTTGGTC TCCAAATCAA CAACCACAAT ACTTCTATCA
ACAGGGTCCT CCACAGGGTC CTCCAGCATT GCACCACCAG GGAGGTCCAG CTGCTCCGCC
TTCTTCTCAT CGTTCACCTT TGAATCCTCA ACTCATTCCG GCGGGAACTT ACCCCGTACC
AGCACCTCCT GGTGTAGCAC CTCCAGGTTA TCCATATGGT CAATACGTAC CTGTACAAGG
TGGTGTAATG ACTCATATCC AACAACAGTA TGCTCCACCG GTGAACAACT GGAGAAGATA
GGCATTGTAT TATATTCGCT CAGGAAGTAT GTATTAATAA ACACGGGCCA AAGAAG
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| Protein sequence | MYAAKRPSQE LSPGSKRQRL HDKLLSDYAS SATETWIACG NCANTLGLVV PAIKSFENAV
VHDPSNAAAL CGLASSLRLN DISLNETIGT QSAIDKLNKL LELFPSLLKQ PAVFKELAEC
YLLIGLNDQA HQAIQTALQL AETDASLWLL LAQTLIRVGA RSHAAGSLTH CLSLLPDSIH
QFSTADIETA RAAHAELAAI AAADGSIELS IAELTATLSL PPPPLSRIDE HIALWCALST
AKERANDIAG AIQACEQSEK AVGMSPRILM THSYLLLFSN DRNNAETAIN LLSKIIDLEK
EKESEQPKND GDFLPWYLLG KAYSLVDQPR LAYDSYQVAL RRASNSPITW LAVGKLYLEL
KQLPDALAAY SQALRLQIDE SSPGTATAWD GLSCVYERCD DQLMDASDAC ARSASCFKVI
GDLKSAAFFE ERAELLAKVS KKEAPVPELR DPPDVPSFLL RDLVALLPSE RIAFIQGPQQ
QEQTQQPQQQ QQQQQQGTPL QQTPNPQHHQ PQHSPAISMI QLQQTPQPPQ AHYPQPQQQQ
PQRTPQQHLF HQGFKQEQKS PRQQQIPPQL PPPQIQQVWS PNQQPQYFYQ QGPPQGPPAL
HHQGGPAAPP SSHRSPLNPQ LIPAGTYPVP APPGVAPPGY PYGQYVPVQG GVMTHIQQQY
APPVNNWRR
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