| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_85882 |
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| Symbol | ECM5 |
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| ID | 4851145 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1039748 |
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| End bp | 1045337 |
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| Gene Length | 5590 bp |
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| Protein Length | 1699 aa |
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| Translation table | |
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| GC content | 39% |
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| IMG OID | 640392853 |
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| Product | protein involved in cell wall biogenesis and architecture |
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| Protein accession | XP_001387844 |
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| Protein GI | 126274131 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.134304 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CACATTACTA TTTCTGTCAA AAGGAGCCAG AGCCACTGGT GACCAATCGC TAGAGCCTAA
AGAGGCACAT TTCCAAAGTT TAACCGATCC AAATTTCCCA AAATTTTCAA GAATTTCATT
AACTACTACA CCTAAGACCT ACAAACCATC CAATCCCATT CTACCATGGC CACATCATAT
CCTGAAGAAG TGGAGACAGC CAAATTTCCA GACTCTCCCC GTTTTTTCAG CCCCAACGGG
TTGCCGGATT TGAAGACTTA CCAGATAATT CGAGATAACA AACCTGTTCA GTTCAACGGA
CAGAGTGCCA ATGTCAATTA CAATCCTTAT ACTATGCCTC AGACGAAGAC CAGAGCCAGT
TTGCCTTTGG ATTACTACCA TCTTCCCAGC AAGATAACTA TAACAGATCT TCCGCCTGAA
GGTGGTATTC CCGTATTCCA ACTAGATCTG GCCCAAAGCG CAGACCCTAT CAGATTCGTA
GAAAGCGTAG AACATGTAGC CAAAAGCTAT GGAGCTGTTA AGATAAAACT TCCAGAACCA
GAAGTTCTGA TAATAAAAAA CAACATCCAG ATCAACCCAG ATCTCTTCTG GTTCCAAACC
AACAAACTTT TGAACAATCC AGGCACAAAC GAGTTGACAA GTAGACTTCG TTTCCACCAT
GATTTGATGA ATTTCCACTC ATCCAATTCC TCAATCAGCA TATCCACTTC CCAAGAGTCT
ACACCTTCCA GAACTCCGCC AATATCGCTG GACTATCCAT CAGATTCTTT TTTACAGCAG
AAACAGCATT CTATAAGTAA CTTGCTCAAT TCACCATCTC CCGGACTAGA ACCAACTGAT
AAACTCGAAC CTACAGCCAA TCCTGTAGAA CTGAATACAT CACAAATAGC CAATGACTCT
TTGAACAAAG ACCTTATTGC TGCTGCAATA TTCAACAGCG CCAAACTATC TGACGTAAAT
GGAGGTTCTG AACTGGCGAC TCCAGAAAGC AAGAAGAGAC AAAGTGTGTC TTTACACAAA
CTTCCTATGA TAGACAAGAG ACCTCTAGAT TTGTACAAAC TCTTCAAGTC TGTCATTATC
CGTGGTGGAT TCATCGAGGT GATTAACAAG AAGTTATGGG CTCAAATTGG AAGAGAACTC
GGATACAGAG GAAAGATCAT GACGAGCTTG AGCAGCTCGT TGAAATCTCT GTACCAACGG
ATATTGTATC CATACGAAAT TTTTCTAACT CAAAGATCCG TCGAATACTT TGATGATCTT
GGTAAGGCAC AACCAGTAGA AGAAAGCGAG TTTAAGAAGC GTAAAATAGA TACCCCTTTG
ATAGTTGGAT CAGCTAAGCA CTTCAAGCGC TCTCTTAGAT CAAAGTCTCA GAAGGGATTT
CTCATTAGTT CACCGCATTT AATGGACCCA AAACAGCCTA ATACATTTGT ATTGAAGCCA
GAAGAGGGAA CCAAGAAGAG AAACAAACGT GCTCCAGACA TCATCTACTC TCCAATATTA
CCTCAGACTC AACTCAATTA TCCATTGAAG GTAATGCTAG AAAACCAGGC AGTGTATGAA
GACGACAGTT CGCTGAAGTT AAGTAGCAAA TGTGCTTCAA CCTATTCGTT ACGCCAGTTT
ATGGAAAAAG ATCTCAAATT CCAAGAGTTT ATCATCCAGC ACAACCGTAC CCAGTTTAGC
AAAGTATCTG CTGGAACTTC CAATAGTTTC TTTCATTTCT ACGATCAGCC TAATAATGCA
CCTATTCCAG ATCGTACCAT CATCAGCTTT GAAAAGTTTG AGCATTTGTA CTGGAAATAT
GTGAGAAATC AAGGAGTTCA CACCATTCTT GATGATGGTC TAGAATTGGA AAATGGCGAA
AGTCTCCCCC AGTCTGTGAA TGGCTCAGGC TTTGTCAGAA TTGGCGACGA CTTGATCAAC
TACAAGAATA GCCTTCACAG TTCGAACGTC AGCACACCAG GCAAGACTGT AAATTCCACC
TACACGAAAC AGCTTAACGT TTTGACATCT ACGTATGGAG TGCCCCCAGA AGAGCCCCAG
TTCAACTCTA AGGACTATAT CAACTACGTG ATTGCGGCAG CGATGCATCC CTGGAATTTG
CACAACCTTC CTTTCTTACC CAACTCATTG TTGGGATCGT TATTGGAGTC AGATTTGAAC
AATCAGGAGT TGACAAATTC GCGATTGAAT ATCGGCATGA CATTCAGTAC TCAGAATTGG
AGATGTGAAG ATCATTTCAC ACACTTAATA AACTTTCAGT TCTTTGGGGC CTTCAGAAGA
TGGTTTTTCA TTCCTGAACT GGAGTTTGAG AAGTTTGAAC AGTTATTGAC GAAGATAAGT
GAATCTGACA AAAGCAGAGC CAGCATCAAC AATAACGACT GGAACGTAGA TGATATCAGC
TCGTATATTG GTGACGAAGA GAACGACTAT GATACCTTAA CCAACTCGTT GGAGAACATG
ATAAATGTCT CCAGGACACC AAGACTCGCA CACAAGAGTC CCAAGTTTCA GAAATTGATC
GACAAGAAGA CGCAGTCTAT TAGATTAAAT CAGGACTACT TGATTACTCC TGAATTGTTA
AATGAAAACG GTATTTTGTT CACGACGACA ATACAAAAAC CCGGAGAAAT GATAGTGAAG
CTACCAAAAA CGTACTCGTG TACCATTTCT ATGGGATTCA ATCTTAGTGA AGAAGTTAAT
TTCGCTACTA AGAATTGGTT AGATTATGCT TTAGAAGCTG AAAAATGGCT TCAATCCCAA
TCAATTCTTC CAAACTTCCT GACTTTTAAG ATGTTGACGA ATTTGATTCA GCTTTACGAT
TCAGGAAAGA ATGTAGGTTT TAACTCAGAA GTATACGAAA GGGTGAATTC TTTGTACGAT
GCATTATACC AGGAGGAATT GGAATTGAGA TCACAGATCC GGAAGCTTAA GATAAAGGAA
ATAAATATCG ATGAAAAACT TTTCAATGAG ATAGATTTCC TAGCAGACGA CGACCTTTCT
TCTACATTTC CATCTCGAAT AGTTCTTGTC GAAACGTCAT CAAAGCAGAG ACTTATATTG
TCTTTAAAGG GATTCTTAAA CTATTACAAT GAAAAGAGCA TTGATATTAA TGACTTCACC
ATCGAATTAC ACATCTTCTA TACGGATGAA AAGCTTAAGA ATTTTTCGAG AATATTAAAT
AACTATTCGA TCGATTATGA ATCATGGTTA TCTAACTACG AAAGTCTCAT GAATGAAAAT
TCTGACTTAA CCTTGAAGAC TTACAAGAGT TTATTGAACG AAGGAGAAAG AATCCTATCA
GCGATAACTT CAGCCAATTG CTTAACCAAC GAAGTCCTGG CACATGAAAA CACTCAGAAA
TTCAGTAAGT TCATGAACTA CATTGAAAAT TTGAGGCAGT TCATATCCAG CTCCAATCAG
TTCATTGAAG AGTGCCAGAA TCTTCTCGCA ATCAAACATC AGCAACGTAT TAGAAACGGA
AATGATTACC AGAATGTAAG TGGATTGAAT GACTTGATTA GTCTCATTGA TCGAATTCCA
ACGTTGAACT TTACCTGCGC TGAAGTTGAC CAAATTCTTG AGTTCAAGAA TGAGATTGAA
AACTTCGACA AAGCTAGTAG AACTTTGTTG GCAAAGAAAA GTAGATCTCT TCAAGAGTTT
GATGATCTCA TTAATTTGGG AGAAAGTTTT GGTATCGAGA TTCCATCTTT GACTTTTATT
ACCAGAGTTA GAGATAGACT AAAATGGATA AGAGTATTTA AGTTGATTGA AAAGGGTGCC
GATCCTTTTG CAGACAAAAA AGAAGTGTTT ACCTTATCAG ACTTGAAAGC GTTTTTCGAC
GAGGGCATCA AGATACTTTC AGAAGAAGAT GCTTCAATGA TTGAAGAGAT CGAAAAGATT
TTGGCACAGA GTGAAAAATT TGATAACGAG ATTACAGAAT TCTTGAAAGT GGAATTTATT
GAGAACCTCA ACTTGGAAAA GTTGACTGGA ATTGTAGAAA GATTCAGGAC GCAAAAGCTA
TTCATTAGTT TAGACAACTA TAACGAAGTT TCTAAAGTGC ATATTCACTC TAATTTGATT
ACGCAGTTTC AAAAGCTTCA GTCCAGTAGT GAACGATTCA CATATGGTGA TGTTCGTCAA
ATGCTGAATT CAATTAATGA GTTTGATTTG AAATTCAATC TCTCTATTGT TGACAGTCAA
TTATCCACTG CTGAAAACTG GGTAAACTCT CTTTGGGAGG AAACCAAAGA CATCAGGGTT
ATAACTACTT TGAGCAAGGA TATTGATTTG GAACATCTTA ATACGAGGTT AACGTTGAAC
ACTCGTTTGA TTGAGAAGTT ATATCAATTG CTCTACAAAT CAGATTTCAG CTTTTCAGAT
GAAGATATTT ATGAGAATTC ATCTTCATTT GTCACCAACT TTGCGAAAGA TGACGATAGC
GCTAACATCA AATTTTATTG CATCTGCCGT GAATACGAAT ATGGAACAAT GATAGAGTGT
GACAAATGTA ATGAATGGTA CCATCTTCAA TGTGTGAACG AGGAAGAATC TAGTAACGAT
TCTGAAGACG AGAATTATGT TTGTCCCATG TGCAAGCTTA TTGAGTCGTC GGAGGTTTTG
GATGATTTTT TGAAGGCACA GCTTACATTG GAAAGAATTT TGTCAATCAA AAATGAAGGT
GATCAATTAA AAGTCTACCC AAGTCAAGAG ATGATGGCTA TTGAAGAGAT ATACGAAACC
GTTCTGGCTC ATAAAATTAA ATTGCAAAAG ATGATTTCTG ACATCAAAGA AAAGTCTGAC
ATTCTGCTTG AGTTGAAACT CGATCAACTT CGATTTATCT TGAGAAAACT CTTTAGTAGT
GGAGTTTTTA TCAAAGATGT TTTTGAGGAA GTTCTAAGTC TTGTTAGAAA ATACACCAGC
GAAGTGAACG AGCTTGCACG ACTTCAATCG CAGGCTTCCA TTGACATTCC AAAGATTGAG
AATGATAAGC AGGTGGCTGT AAGTGTAAGT GCAAGTGCAG GTGTTGTAGA GACTGGTGAG
GGTGCCGAGA ATTTACTACC AGAAATTAAA GAGAGCTCAC TTTCATTGCA AGCAGATGTA
CCACGCTCTA GTATTCATAA TGCGAATATT CTTCAAAGAG TTGATTTCAA CGGCAACGAA
GAAAGCATAG AACAGATAGA CCATGCCATA CTTCCAGAAA TTCAGAAAGG GAACATTAAT
GAACCCAAAG AAAAAGCTCA TTTGGAGCCT ATAGCTACGA GCCAAGAACA GTCGATTTCG
CCTGCAATCA CTGAACCAAA AGGGGAAATC CCAGCAATAA AAGTGGAAGT GGGGACCATT
GGGCTAGGTA TCACAACGGA TGCAACAATA GAATCAGAAA TAGTTCTTTG TCCAGAACAA
ACATCTGTCT CAGAAACTCC AATATCCGTG GCTACAGTTA CGCAACTAAG ACCCACCTTG
GAACCGGAGC AGCCTCTTTT GCTGTCGAAG ACAGAATCTG TAACCACAGA AGCAGAAAAG
ATAGCCATCC CCTCGTGAAC AGACAGAATA TAGTTCAGGT AATGATAACA TGTCACGAAT
AAAAAGATAG
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| Protein sequence | MATSYPEEVE TAKFPDSPRF FSPNGLPDLK TYQIIRDNKP VQFNGQSANV NYNPYTMPQT
KTRASLPLDY YHLPSKITIT DLPPEGGIPV FQLDLAQSAD PIRFVESVEH VAKSYGAVKI
KLPEPEVLII KNNIQINPDL FWFQTNKLLN NPGTNELTSR LRFHHDLMNF HSSNSSISIS
TSQDKKRQSV SLHKLPMIDK RPLDLYKLFK SVIIRGGFIE VINKKLWAQI GRELGYRGKI
MTSLSSSLKS LYQRILYPYE IFLTQRSVEY FDDLGKAQPV EESEFKKRKI DTPLIVGSAK
HFKRSLRSKS QKGFLISSPH LMDPKQPNTF VLKPEEGTKK RNKRAPDIIY SPILPQTQLN
YPLKVMLENQ AVYEDDSSLK LSSKCASTYS LRQFMEKDLK FQEFIIQHNR TQFSKVSAGT
SNSFFHFYDQ PNNAPIPDRT IISFEKFEHL YWKYVRNQGV HTILDDGLEL ENGESLPQSV
NGSGFVRIGD DLINYKNSLH SSNVSTPGKT VNSTYTKQLN VLTSTYGVPP EEPQFNSKDY
INYVIAAAMH PWNLHNLPFL PNSLLGSLLE SDLNNQELTN SRLNIGMTFS TQNWRCEDHF
THLINFQFFG AFRRWFFIPE LEFEKFEQLL TKISESDKSR ASINNNDWNV DDISSYIGDE
ENDYDTLTNS LENMINVSRT PRLAHKSPKF QKLIDKKTQS IRLNQDYLIT PELLNENGIL
FTTTIQKPGE MIVKLPKTYS CTISMGFNLS EEVNFATKNW LDYALEAEKW LQSQSILPNF
LTFKMLTNLI QLYDSGKNVG FNSEVYERVN SLYDALYQEE LELRSQIRKL KIKEINIDEK
LFNEIDFLAD DDLSSTFPSR IVLVETSSKQ RLILSLKGFL NYYNEKSIDI NDFTIELHIF
YTDEKLKNFS RILNNYSIDY ESWLSNYESL MNENSDLTLK TYKSLLNEGE RILSAITSAN
CLTNEVLAHE NTQKFSKFMN YIENLRQFIS SSNQFIEECQ NLLAIKHQQR IRNGNDYQNV
SGLNDLISLI DRIPTLNFTC AEVDQILEFK NEIENFDKAS RTLLAKKSRS LQEFDDLINL
GESFGIEIPS LTFITRVRDR LKWIRVFKLI EKGADPFADK KEVFTLSDLK AFFDEGIKIL
SEEDASMIEE IEKILAQSEK FDNEITEFLK VEFIENLNLE KLTGIVERFR TQKLFISLDN
YNEVSKVHIH SNLITQFQKL QSSSERFTYG DVRQMLNSIN EFDLKFNLSI VDSQLSTAEN
WVNSLWEETK DIRVITTLSK DIDLEHLNTR LTLNTRLIEK LYQLLYKSDF SFSDEDIYEN
SSSFVTNFAK DDDSANIKFY CICREYEYGT MIECDKCNEW YHLQCVNEEE SSNDSEDENY
VCPMCKLIES SEVLDDFLKA QLTLERILSI KNEGDQLKVY PSQEMMAIEE IYETVLAHKI
KLQKMISDIK EKSDILLELK LDQLRFILRK LFSSGVFIKD VFEEVLSLVR KYTSEVNELA
RLQSQASIDI PKIENDKQVA VSVSASAGVV ETGEGAENLL PEIKESSLSL QADVPRSSIH
NANILQRVDF NGNEESIEQI DHAILPEIQK GNINEPKEKA HLEPIATSQE QSISPAITEP
KGEIPAIKVE VGTIGLGITT DATIESEIVL CPEQTSVSET PISVATVTQL RPTLEPEQPL
LLSKTESVTT EAEKIAIPS
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