| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_85839 |
|---|
| Symbol | FST12 |
|---|
| ID | 4851379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | - |
|---|
| Start bp | 1647155 |
|---|
| End bp | 1650008 |
|---|
| Gene Length | 2854 bp |
|---|
| Protein Length | 779 aa |
|---|
| Translation table | |
|---|
| GC content | 41% |
|---|
| IMG OID | 640393087 |
|---|
| Product | zinc finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type |
|---|
| Protein accession | XP_001387958 |
|---|
| Protein GI | 126274428 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.976496 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CGCCCATACT TAGATACAAT TTATTTTTTT TGCCAAAAAA AAATGGAAAT CTTGATGGAG
CCTAAGCGGA AAAAAACCCC CATCATCATC TCATCCGTCC TCGAGCCGGA GAGACGAAAG
AAAGTCACCA AGGCGTGTGA CTATTGCAAG AAGCGAAAAT ATAAATGTAG CGGCAAATCG
CCTTGCTATC TCTGTGAAAA GAAGAAGATC GAATGCAAGT TCTCCATAGT CGACAAGAGA
ACAACCAAAG TCAAGAAGAA GAAAGGGGGT ATTTCTAAAT CCACTAATTC ACACCCCGAT
GGTATAGCGG CCAGTTCTAG CGAAATAGCC GCGGACGCTC TCGTCCAATC AAACAGCTAC
GTCGATCTGG CTCCTGACGG CTCTTCATCC AAAGATAACC TAGGTTCCAA GCCAAAAGCC
GCTTATATCC CCAAAAGTCT CCAGCCACTT CTTTCCTTTC CCTTGGGCGA AGATGGCGAA
ACAGTCAGTG ATGACGAAGG TGGATATTCT AAGCCCATGG ATGATGACGA AGATATGCCC
GAAGAAGATC AAAACGGAAT TGAAAGTAGA GAATCCCTAA GAGATGAACA CGAAGTCCTA
AACAAAACTA CCCAGAGACT GAAAGAGTCT GATCACAGAA GAACAGAGAA ACCAACAGGC
TTGTCCAACA ACTATGGCAA GAGTTCTAGG CTCTTGTTTG ATTCTGCTGG AAATTTGCGC
TATATTGGAG AAAGCAGTCC TTTATCCCTT TTATTTGAAT GTCGTAACAT TTTCCTTAGC
ACTATTGGAA GCTGTGAGTT CACATCTGAT CCTCAGGGTG TTAACATAAT TGATGAACCA
GGAAAGATCA AAAACGGAAT TCCTGTGCAA TTGCCGAAAA GAGAACACTG CAACATTCTT
GTTAAGTTCT TTGAATCTAA CGTCAACTCC ACCTGGTACG TTTTCAACAT GCGCTACTTC
AAGGAGTACA TTGTAGACTA CATTTACGAC AACCCTATTA GGGCCAGACC CGAAAAACTA
GTATTGCTCC ATTTGGTGTT AGCGTTGGGT TTGTTGTATG CTGAAACTTC CAAAAGCTTT
CTCATTGAAG ACTTGGAGTC TTCTTCCATC AACTCGCTAG CTTTCTTTGA AAGTGGCTGT
AATTTGATGA GAAACACCGT GGATGATGGG AAGTTGTGGC TTTCTGAAGC ATATCTCTTG
ATATACTTCT ATTACCAATC CACTTCCAAA AGAAGTACAT CCTGGATTAT GTTAGGCACG
GCTATCAGAA ACGCTCAAGC TTTAGGTTTG CATCGTAAGT TCATCAACGA GTCATTCAGA
GACAGAGAGT ATATTATGCA TCGCCGAAAA TTATGGAGAA GTTTGTATGT CTGCGACAGA
AGCTCTTCAA TACTTTTGGG ACGCCCACTT TTGATCGGTG ACTACGACTG GGACGACTTT
GACAACGTGG ATCTTATTGA CTACGAGGAT AAGATCAATC ATGACAAGAA TATTTATTGC
TTGATAGAAA TTGCTAAAGT GTGCAAAATC AACGGGAAAA TCGTGCATAA TTTCTACTTG
GATGGGATGA TATCACCTGC ACGAGCAGAG AAGTTAGCAA TCGAGTTAAA GCTATGGTCA
ATTAACTTGC CCAAAGAATT ACAAATCGAC AGAATTTTAA GAGGCACTAA CCTGGAAGGT
CTGCTGATAG AACAACCTAC TCAAGATCGA TTTCCCAACA GAGAAGTCAG TTCGGATAAA
TTTGCCTTGC TATTGCTTCA CTTATCCCAA TTGTATGGAA TTATGCTTTT AAGTAAGCCA
TTTTTCATGT ACATCGCTTT CAAAAGCAAC ATAGCCAATA ATTCTGGTGG ACTGGTGCCA
CCTAGAAGAA ACAGACATGA AGCTACAATG GTCAATTTTT GCAAGGCAAG CGTGAAATCG
TCAGTATTAA CTATTCAGCT TATTAATCTC TACCGTGAAC GACACCCGCA GAGAATAGAG
CTGTACACCA CTGTAAATTG TTGCTTTATG GCAGCATTAA TACTTGGTTT GTCTATTCTC
CATAGGAAGA ATAACCCTGA ATTTCAAGAT GAGTACAATA TTGCTCTTCT TATGGAAACA
CTCAATACAG CAAAGATAAT TTTATCCTTC TACGGCCCAA TTAATGCTAC ATCTCAGCGG
TTCTACAAAA TTGTTGGTAA GATGCAACGT TCACTAGAGG CAGCCTATGG AGACATGGAA
CATATGATAT CATCTTCTGT CTCTTCTCCG AATAATATTA GAGACGGCAT TTTCAGCACT
CCTTCGGCGG CTCCTTTGAA TATTGCTGCT TTACAGAACC ACTCTCTAAG AGGAGGAAAT
GCCAGTGGTG AAGATCGCAG ATTCTATGCA AAGAAGTCTA ATTATAACAA CGAGTCTATT
GAACGGAGCA ATTCTAACAA TTCCAACAAT TCCAACAATT CCAACAATTC AGACAATTCA
GACAACTCCA ACAACTCCAA CAACTCCAAC AGTAACAATA ATATGACAGG AAATCCTAAT
CACCAAGGGG GAGTTAGCAA AATTAACACT ATTCCATCTA CACCTTTTGG CAGCTCGTTG
ATCAATACAG ACTTGGAAGC GCTTATGAAC TTTCAGCAAT TCTTCGTCCC TTCGGCTTCC
AAAGCAGGTG GCATCAACGA AGATTTCGCT ACTCAATCCA CAACTTCGTC AGCTGCTGGT
GAACCGCTTG AAGCATTTAT GTATAATATG GGAACAAATG ATATCTTGTT CGATGGAAAT
ATTTAATTCT TGAATTTATT TTCACTATGT ATACTATATT TTCAATTTAG CCGCGCCCGC
CCAGACGTGT ATAGCAATAT ATGAATTTTC ATAG
|
|---|
| Protein sequence | MEILMEPKRK KTPIIISSVL EPERRKKVTK ACDYCKKRKY KCSGKSPCYL CEKKKIECKF
SIVDKRTTKV KKKKGGISKS TNSHPDGIAA SSSEIAADAL VQSNSYVDLA PDGSSSKDNL
GSKPKAAYIP KSLQPLLSFP LGEDGETVSD DEGGYSKPMD DDEDMPEEDQ NGIESLSNNY
GKSSRLLFDS AGNLRYIGES SPLSLLFECR NIFLSTIGSC EFTSDPQGVN IIDEPGKIKN
GIPVQLPKRE HCNILVKFFE SNVNSTWYVF NMRYFKEYIV DYIYDNPIRA RPEKLVLLHL
VLALGLLYAE TSKSFLIEDL ESSSINSLAF FESGCNLMRN TVDDGKLWLS EAYLLIYFYY
QSTSKRSTSW IMLGTAIRNA QALGLHRKFI NESFRDREYI MHRRKLWRSL YVCDRSSSIL
LGRPLLIGDY DWDDFDNVDL IDYEDKINHD KNIYCLIEIA KVCKINGKIV HNFYLDGMIS
PARAEKLAIE LKLWSINLPK ELQIDRILRG TNLEVSSDKF ALLLLHLSQL YGIMLLSKPF
FMYIAFKSNI ANNSGGLVPP RRNRHEATMV NFCKASVKSS VLTIQLINLY RERHPQRIEL
YTTVNCCFMA ALILGLSILH RKNNPEFQDE YNIALLMETL NTAKIILSFY GPINATSQRF
YKIVGKMQRS LEAAYGDMEH MISSSVSSPN NIRDGIFSTP SAAPLNIAAL QNHSLRGGNA
SDLEALMNFQ QFFVPSASKA GGINEDFATQ STTSSAAGEP LEAFMYNMGT NDILFDGNI
|
|---|
| |