| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_85822 |
|---|
| Symbol | NUO78 |
|---|
| ID | 4851514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 2028032 |
|---|
| End bp | 2030820 |
|---|
| Gene Length | 2789 bp |
|---|
| Protein Length | 722 aa |
|---|
| Translation table | |
|---|
| GC content | 44% |
|---|
| IMG OID | 640393222 |
|---|
| Product | NADH dehydrogenase (ubiquinone) 78K chain precursor, 5-prime end |
|---|
| Protein accession | XP_001387625 |
|---|
| Protein GI | 126274713 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) |
|---|
| TIGRFAM ID | [TIGR01973] NADH-quinone oxidoreductase, chain G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.28905 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0501454 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CTCAACAAGT GGAAACGCTA CAAATTCGGT TCTCTTACGT CGTGTGTGCA GTGGCAGAGT
TTGAATCCTT CATTTCTTTC GATTTTGCTA CCAGATTTTA ACGTATCTGA AAGTGAATTG
GATAGTAGAG TCTTTTCGTA TCACAGATTT GTATCACCAT AGTCATCTAA TAGTCTTTCG
TTGGCTGGAT TTTGACCGAT ATCAACAACA AGTTTGATAC AGCATTATTA AAGCATTATT
GTCATCAGTA TTTGCTTTTG TCAATTTTCA AAACTCATAC CTGAAAGGTT CTGAATCTCG
AACATAATCT TATTGATTAA AATTCATATT TGAAATCATA ACTTCAACTG ATAGCTGGAA
ATTTCATTAC TATAAATCAC AATATAAAAT TTCATAAGAT GCATTCCGTC AGAAACAACC
TCTTGAGATC GTCCAGACGT TACCTTTCGG CCTCGATGAG AAGAGCTGCT GAGGTAGAAG
TCACCGTTGA CGGCAGAAAA GTGCTGATTG AAGCTGGCTC GTCGATTATC CAGGCTGCTG
AGTTGGCTGG TGTAACTATT CCTCGTTACT GTTACCACGA GAAATTGGCC GTTGCTGGTA
ACTGTCGTAT GTGTCTTGTA GATGTTGAGA GAATGCCAAA GTTAATTGCC TCGTGTGCCA
TGCCTGTTCA GAACGGCATG GTGGTCCATA CAGACTCTGA AAGAATCAAG AAGGCCAGAG
AAGGTGTCAC CGAGATGTTG TTGGAAAATC ATCCTTTGGA TTGTCCTGTG TGTGACCAGG
GTGGAGAATG TGATTTACAA GAACAATCAC AGAGATATGG ATCAGACAGA GGCAGATTCA
AGGAGTTGGT AGGTAAGAGG GCCGTAGAAA ACAAAGCCAT TGGTCCCTTA GTCAAAACTT
CGATGAATAG ATGTATCCAT TGTACCAGAT GTGTCCGTTT CATGAACGAT GTCGCTGGTG
CTCCAGAGTT TGGAACAGCT GGTAGAGGAA ACGACATGCA AATCGGAACC TACATAGAGA
GAAACATCAA CTCCGAGATG TCGGGTAACA TTATCGACTT GTGTCCTGTT GGTGCCTTAA
CTTCCAAGCC ATACGCTTTC AGAGCCAGAC CTTGGGAGTT GAAGAGAACT GAAACCATCG
ATGTTTTCGA CGCTGTAGGT TCAAACATCA GAGTAGATGC CAGAGGTATT GAGGTAATGA
GAGTTTTGCC CAGATTGAAC GACGAAGTCA ACGAAGAGTG GATCTCTGAC AAGTCCAGAT
TTGCATGCGA CGGTTTGAAG ACCCAACGTT TGACTTCTCC TTTGATCAGA AATGGCGACA
AGTTTGAAGT CGGCACCTGG GACGAAGCCT TATCTACTAT CGCTGCCGCA TACGCCAAGA
TTGCACCAAA GGGCGATGAG TTGAAAGCTA TTGCTGGTGC TTTGACTGAT GCCGAGTCCA
TGGTGGCACT CAAGGACTTG GTCAACAAGT TGGGATCAGA AAACACGACA ACTGATGTCA
AACAGGCTGT AGATGCTCAT GGCGTGGATA TCAGATCCAA CTACATCTTT AACTCGACCA
TTGATGGCAT TGAAGATGCA GACCAGATTT TGTTGGTTGG TACCAATCCA AGACACGAAG
CTGCTGTGCT CAACACCAGA CTTAGAAAAG TGTGGTTAAG ACAAGAATTG GACATTGCCT
CTGTAGGCCA GGAGTTCGAT TCGACCTTCA AGTTGCAACA CTTGGGTGTA GACGCCAACG
CTTTAAAGCA GGCCCTTGCT GGAGATGTAG GAAAGAAGTT GTCTTCTGCT AAGAAGCCTT
TAATCATCGT AGGTTCTGGT GTCGCAGACT CTGAAGACGC TTCTGCTATC TACAAGTTGG
TAGGTGAATT CGCATCCAAG AACACCAACT TCAACTCTGC TGAGTGGAAT GGTGTTAACT
TGTTGCATCG TGAGGCTTCT AGAGTTGCTG CCTTAGACAT TGGCTTCCAG ACATTATCAC
CTGAAACGGC TAAGACAAAG CCTAAGTTCG TCTACTTATT GGGAGCAGAC GAAATCTCCA
ACAAGGATAT CCCCAAGGAC GCTTTTGTTG TCTACCAGGG CCATCACGGT GACTTGGGAG
CCTCTTTTGC TGATGTAATC TTACCTGGCT CTGCTTACAC TGAGAAATCT GCCACCTACG
TGAATACTGA AGGTAGAACC CAGGTTACAC GTGCTGCTAC CAACCCTCCT GGTGTTGCCC
GTGAAGACTG GAAGATTGTC AGAGCCTTGT CCGAATACTT GGATGCCACT TTGCCCTACG
ACGACATTGT CTCTGTAAGA ATCAGATTGG GTGAAATTGC ACCTCATTTG GTGAGACATG
ATGTCATTGA GCCAGCTTCC AGTGACATTG CTAAGATCGG TTTCGCTGCC TTAGTCTCAA
AGAACAAGAG TGCCACCATC TCTGGAACAC CTTTGAAGAA CCCAATCGAC AACTTCTACT
TCACTGATGT CATCTCCAGA TCTTCGCCTA CTATGGCCAG ATGTATTTCT TCTTTTGGTG
CCAAGGTTGA CAAGATTACC GACGACAAAC CCGACATCAA CTTCTAAACG CCATCCACTT
CCAACCATCA ACCCTAAACA CACATTCCTG TTTTTATTGT TCTTGCATAT TCATATTCAT
CGTGTTCAGC GGAACATGCT CATGACGTCT TTGACGACAC CAAAACCACC TTCTAACGTT
GAACGCTGAA AAGTTGTTAA ACTATTTATT CATTGAAGAT GTTCTTTTTC CCTATTTGTT
TCATAGGCAT ACATATACAT AATATTAGA
|
|---|
| Protein sequence | MHSVRNNLLR SSRRYLSASM RRAAEVEVTV DGRKVLIEAG SSIIQAAELA GVTIPRYCYH
EKLAVAGNCR MCLVDVERMP KLIASCAMPV QNGMVVHTDS ERIKKAREGV TEMLLENHPL
DCPVCDQGGE CDLQEQSQRY GSDRGRFKEL VGKRAVENKA IGPLVKTSMN RCIHCTRCVR
FMNDVAGAPE FGTAGRGNDM QIGTYIERNI NSEMSGNIID LCPVGALTSK PYAFRARPWE
LKRTETIDVF DAVGSNIRVD ARGIEVMRVL PRLNDEVNEE WISDKSRFAC DGLKTQRLTS
PLIRNGDKFE VGTWDEALST IAAAYAKIAP KGDELKAIAG ALTDAESMVA LKDLVNKLGS
ENTTTDVKQA VDAHGVDIRS NYIFNSTIDG IEDADQILLV GTNPRHEAAV LNTRLRKVWL
RQELDIASVG QEFDSTFKLQ HLGVDANALK QALAGDVGKK LSSAKKPLII VGSGVADSED
ASAIYKLVGE FASKNTNFNS AEWNGVNLLH REASRVAALD IGFQTLSPET AKTKPKFVYL
LGADEISNKD IPKDAFVVYQ GHHGDLGASF ADVILPGSAY TEKSATYVNT EGRTQVTRAA
TNPPGVARED WKIVRALSEY LDATLPYDDI VSVRIRLGEI APHLVRHDVI EPASSDIAKI
GFAALVSKNK SATISGTPLK NPIDNFYFTD VISRSSPTMA RCISSFGAKV DKITDDKPDI
NF
|
|---|
| |