Gene PICST_85801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_85801 
SymbolRS6 
ID4851332 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1522143 
End bp1523533 
Gene Length1391 bp 
Protein Length236 aa 
Translation table 
GC content41% 
IMG OID640393040 
Productribosomal protein S6A (S10A) (rp9) (YS4) 
Protein accessionXP_001387523 
Protein GI126274373 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2125] Ribosomal protein S6E (S10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.950125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ACCAGTAGTT CAAGATGAAG GTATGTGAAG ATAGATATGA ATGAATTAAA GGAGACTATC 
CAGAGATATA CCCAGCCATG AGAGACGTCC ATACGAGCAT CCGGCTCTTG AATTGAATTG
TTGAAATCAG CCATATCCAT TGTTGAGAAT AGTGAAAAAT TTCATCACAA GCTCGAAGTA
TGTTCGACGA CCATAAAAGT TAAATCAAAC AGCGTTCAAA GCAATGTAGT ACACAATAAA
AAGTGAAAGG AAATGAATAG CGGAGCCTGC TGCGGAAGCC AGTAGTCTGT TCCAGGTCCA
TCGAATCAAT TTTGTCCAGA GTTTAAAGTA GAGTAAAAAG ATGCAGAAGC AACTTATCAA
GTGATTGAAT ACCGTTAGAG CTCTTTGCAA AAGTTGACCA TTCCATCAGA GCACACCCGT
AACTTTACAG ATCCAGGCGA CGATGTCGTG TATGAATTTT CAGTCGGCGG CATATTTTCA
GATACTCCCT GTAACATTGC ATTAGGAATT CAATACTAAC ATAGCTATAG TTAAACATTT
CTTATCCAGC CAACGGTACC CAAAAGTGTA TCGAAATCGA CGATGAACAC AAGTTGAGAG
TTTTCTACGA AAAGAGAATG GGTCAAGAAG TCGAAGGTGA CTCTGTCGGT GACGAATTCA
AGGGTTACAT CTTCAGAATC ACTGGTGGTA ACGACAAGCA AGGTTTTCCT ATGAAGCAAG
GTGTCATGCA CCCAACCAGA GTCAAGTTGT TGTTGGCTAA GGGTCACTCT TGTTACAGAC
CAAGAAGAAC CGGTGAAAGA AAGAGAAAGT CCGTCAGAGG CTGTATCGTT GGTCAAGACT
TGGCTGTCTT GGCTTTGTCC ATTGTCAAGC AAGGTGACTC CGACATCGAA GGTTTGACCG
ACTCCACCAC CCCAAAGAGA TTGGGTCCAA AGAGAGCCAA CCACATCAGA AAGTTCTTCG
GTTTGACCAA GGAAGACGAC GTCAGACAAT TCGTTGTCAG ACGTGAAGTT ACCAAGGGTG
ACAAGTCCTA CACCAAGGCT CCAAAGATTC AACGTTTAGT TACCCCACAA ACCTTGCAAA
GAAAGAGAGC TCTTAAGGCT CAAAAGGTCA AGAACGCTCA ATTGCAAAGA GATGCTGCTG
CTGAATACGC TCAATTGTTG GCCAAGAGAT TGCACGAACG TAAGGAAGAA AAGCTCGAAA
TCAGAAAGAA GAGAGCTTCC TCTTTGAAGA ACTAAGGAAG GTGATCCCTA GAAGATTATT
ATTGGTTACA TAACTTTAAT ACTAATAAAA TTCATTGTAT GTCATAATGG TCTTTTATTG
TTGTCTTCCT TTCTTGTCAT TTCTTTACTT TAGTCTATCT TGTGTATTTA ATAAAATATA
AATATCGGTA T
 
Protein sequence
MKLNISYPAN GTQKCIEIDD EHKLRVFYEK RMGQEVEGDS VGDEFKGYIF RITGGNDKQG 
FPMKQGVMHP TRVKLLLAKG HSCYRPRRTG ERKRKSVRGC IVGQDLAVLA LSIVKQGDSD
IEGLTDSTTP KRLGPKRANH IRKFFGLTKE DDVRQFVVRR EVTKGDKSYT KAPKIQRLVT
PQTLQRKRAL KAQKVKNAQL QRDAAAEYAQ LLAKRLHERK EEKLEIRKKR ASSLKN