Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_85801 |
Symbol | RS6 |
ID | 4851332 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 1522143 |
End bp | 1523533 |
Gene Length | 1391 bp |
Protein Length | 236 aa |
Translation table | |
GC content | 41% |
IMG OID | 640393040 |
Product | ribosomal protein S6A (S10A) (rp9) (YS4) |
Protein accession | XP_001387523 |
Protein GI | 126274373 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2125] Ribosomal protein S6E (S10) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.950125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ACCAGTAGTT CAAGATGAAG GTATGTGAAG ATAGATATGA ATGAATTAAA GGAGACTATC CAGAGATATA CCCAGCCATG AGAGACGTCC ATACGAGCAT CCGGCTCTTG AATTGAATTG TTGAAATCAG CCATATCCAT TGTTGAGAAT AGTGAAAAAT TTCATCACAA GCTCGAAGTA TGTTCGACGA CCATAAAAGT TAAATCAAAC AGCGTTCAAA GCAATGTAGT ACACAATAAA AAGTGAAAGG AAATGAATAG CGGAGCCTGC TGCGGAAGCC AGTAGTCTGT TCCAGGTCCA TCGAATCAAT TTTGTCCAGA GTTTAAAGTA GAGTAAAAAG ATGCAGAAGC AACTTATCAA GTGATTGAAT ACCGTTAGAG CTCTTTGCAA AAGTTGACCA TTCCATCAGA GCACACCCGT AACTTTACAG ATCCAGGCGA CGATGTCGTG TATGAATTTT CAGTCGGCGG CATATTTTCA GATACTCCCT GTAACATTGC ATTAGGAATT CAATACTAAC ATAGCTATAG TTAAACATTT CTTATCCAGC CAACGGTACC CAAAAGTGTA TCGAAATCGA CGATGAACAC AAGTTGAGAG TTTTCTACGA AAAGAGAATG GGTCAAGAAG TCGAAGGTGA CTCTGTCGGT GACGAATTCA AGGGTTACAT CTTCAGAATC ACTGGTGGTA ACGACAAGCA AGGTTTTCCT ATGAAGCAAG GTGTCATGCA CCCAACCAGA GTCAAGTTGT TGTTGGCTAA GGGTCACTCT TGTTACAGAC CAAGAAGAAC CGGTGAAAGA AAGAGAAAGT CCGTCAGAGG CTGTATCGTT GGTCAAGACT TGGCTGTCTT GGCTTTGTCC ATTGTCAAGC AAGGTGACTC CGACATCGAA GGTTTGACCG ACTCCACCAC CCCAAAGAGA TTGGGTCCAA AGAGAGCCAA CCACATCAGA AAGTTCTTCG GTTTGACCAA GGAAGACGAC GTCAGACAAT TCGTTGTCAG ACGTGAAGTT ACCAAGGGTG ACAAGTCCTA CACCAAGGCT CCAAAGATTC AACGTTTAGT TACCCCACAA ACCTTGCAAA GAAAGAGAGC TCTTAAGGCT CAAAAGGTCA AGAACGCTCA ATTGCAAAGA GATGCTGCTG CTGAATACGC TCAATTGTTG GCCAAGAGAT TGCACGAACG TAAGGAAGAA AAGCTCGAAA TCAGAAAGAA GAGAGCTTCC TCTTTGAAGA ACTAAGGAAG GTGATCCCTA GAAGATTATT ATTGGTTACA TAACTTTAAT ACTAATAAAA TTCATTGTAT GTCATAATGG TCTTTTATTG TTGTCTTCCT TTCTTGTCAT TTCTTTACTT TAGTCTATCT TGTGTATTTA ATAAAATATA AATATCGGTA T
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Protein sequence | MKLNISYPAN GTQKCIEIDD EHKLRVFYEK RMGQEVEGDS VGDEFKGYIF RITGGNDKQG FPMKQGVMHP TRVKLLLAKG HSCYRPRRTG ERKRKSVRGC IVGQDLAVLA LSIVKQGDSD IEGLTDSTTP KRLGPKRANH IRKFFGLTKE DDVRQFVVRR EVTKGDKSYT KAPKIQRLVT PQTLQRKRAL KAQKVKNAQL QRDAAAEYAQ LLAKRLHERK EEKLEIRKKR ASSLKN
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