| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_81269 |
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| Symbol | |
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| ID | 4851648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2448441 |
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| End bp | 2449714 |
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| Gene Length | 1274 bp |
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| Protein Length | 414 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640393356 |
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| Product | predicted protein |
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| Protein accession | XP_001386801 |
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| Protein GI | 126275149 |
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| COG category | [A] RNA processing and modification
[T] Signal transduction mechanisms |
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| COG ID | [COG5238] Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.446768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.64637 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCTGA CTGTGGTTGA TTTAGGTATC GCTGAAGAAA ACACTTTCTC TCTTGCGGGA
AAAGCCCACA AGTTTGACTC CGAGTCGGAC ATCGAGCCTA TTTTGGCTCA GCTTAAGGAA
GCTAAGAATG TGAAAAAGAT TGACTTTTCA GGAAACACTA TTGGTATTGA AGCATCCAAG
AGTTTGAGCG AAGCCATTTT GGTTCATAAG GATACCATTG TAGAAGTCAA CTTCTCTGAC
TTATACACAG GTAGATTGAA TACTGAGATT CCTCAATCTT TGGGATACTT ATTGCCTAGT
TTGTTGAAGT TACCAAACTT GACCTACATC AACTTGAGTG ACAATGCCTT TGGATTACAG
ACAATTGACC CCATAGAAGA CTACTTGGCC AAGGCAGTTT CTATCGAGCA TTTGATCTTG
TCCAACAACG GTATGGGGCC ATTTGCTGGA GCTAGAATCG GTGGATCTTT GTTCAAGTTA
GCCAGAGCCA AGAAGGCAGC TGGCAAGCCA TCGTTGAAGA CGTTTGTTTG TGGTAGAAAC
AGATTAGAAA ACGGCTCCAT CAACTATTTG GCTGTTGGCT TGAGAAACCA TGCTGATTTG
AAAATTGTTA GTTTGTACCA AAACGGCATT AGACCCGCTG GTATTTCTAA GTTGGTGGAA
AAGTCTTTAG CATTGATCAA GAATTTGGAA GTTGTTGATT TGGAAGACAA CACCATTACT
CCTACAGGTG CAGCCAAGAT TGCCGAGTCA CTTGCAAACT GGGAAAACTT AGTAGAGTTG
AATCTTAACG ATTCCTTGTT GAAGAACGAA GGTTTCACCA AGATTGCTGA AGCATTCAAG
ACCGGAGCTT CCAAGAAAGA CTTGACTTTC TTGAAGTTGG TTTACAATGA ATTGAAAGCT
GATTCGTTGA AGGCGTTGGT TGATATTGTA GACAAGAAAT TGCCCAACTT GAAGAAGTTA
GAGTTGAATG GTAACATCTT CGACGAAGAA GACGAATTTG TTGTCAAGAT AAACGATATC
TTTGAAGACA GAGGATTTGG TGAGTTGGAC GAATTGGACG AGCTTGAAGA ATTGGACAGC
GATGAAGAAG ACGAAGAAGA AGATGAAGAT GAAGAAGAAG ACACCTTAGA AGAAGACTTA
GATTTGGAAG AGTTAGAAAA GGACTTGGCC GGTTTGGAGA TCGAAGACAC TGATGTTTCG
GTTGACAAGC TTGCTGAAGA ATTGGCAGGA GCTCACCTCA AATAGATATA TAGAGTAATA
ATGAATTAAG ACTG
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| Protein sequence | MILTVVDLGI AEENTFSLAG KAHKFDSESD IEPILAQLKE AKNVKKIDFS GNTIGIEASK
SLSEAILVHK DTIVEVNFSD LYTGRLNTEI PQSLGYLLPS LLKLPNLTYI NLSDNAFGLQ
TIDPIEDYLA KAVSIEHLIL SNNGMGPFAG ARIGGSLFKL ARAKKAAGKP SLKTFVCGRN
RLENGSINYL AVGLRNHADL KIVSLYQNGI RPAGISKLVE KSLALIKNLE VVDLEDNTIT
PTGAAKIAES LANWENLVEL NLNDSLLKNE GFTKIAEAFK TGASKKDLTF LKLVYNELKA
DSLKALVDIV DKKLPNLKKL ELNGNIFDEE DEFVVKINDI FEDRGFGELD ELDELEELDS
DEEDEEEDED EEEDTLEEDL DLEELEKDLA GLEIEDTDVS VDKLAEELAG AHLK
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