| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_80937 |
|---|
| Symbol | MPT5 |
|---|
| ID | 4851919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | - |
|---|
| Start bp | 3182188 |
|---|
| End bp | 3184705 |
|---|
| Gene Length | 2518 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | |
|---|
| GC content | 45% |
|---|
| IMG OID | 640393627 |
|---|
| Product | protein necessary for high temperature growth |
|---|
| Protein accession | XP_001387179 |
|---|
| Protein GI | 126276020 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG5099] RNA-binding protein of the Puf family, translational repressor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTAGCCA AGTCTGTCTG TCTGTCTGTT GTTAGCCGTG TGAGTGTTTG TCTGAGTTTT
GCCTCTGCCT TTCCCTAGTG TCTCCGTTTT CCCTCTGTCT GACACTCTTT TCTCTGTCCG
TCTGCCTAGC TGTCCGGTGC CCATCCGTTT CTGGCTCAAA CCCAGATTCC TACCTAGGTT
CGACTCGACT TTCGTGATAG GCTGCTTTTC CTGATCAACA ATCTGGATCG CTGCCGCCAT
CGCCAGACAC CACGTCCAAC ACCACCTGTT GACACTGATC CCACAGCGTT ACTGTCTGCA
CTTTACTCTC TGCGCTGCAG CTACTTTATT GCTCCGACAC TAGTCTGATA TCAAAAATAT
AGCACAGTGG TTATTCAACA AAATTTTGCA ACTGGGTTCT TCTCATATCC ATATTCTTCT
CGTCATCAAC AACATCTGAG TCCCATAGTC ATTTCCCAGC ATCGTCAACT GCCACGTTCA
CTGACAGATT CTGACCTTTT CTACGAACCA AGTCCCACTT TTCCACCAGC CTCAGAATTT
TTGCCAGATG TCTCACAACC ACAATTTGTC CATTAACCTG GTCAATTCTC TAATAGAACC
TACAACTCCG CCAAACCTCG TCCAGAGACA TACCCGTTCC ACACTGGTGC TTTCTGGCCT
GGGCGGCTCA GGTGCGGTAG GCTCTTCTGT TGCTACGCCT TTCCATCACA CAAAATCTGG
CTCTCTTTCT GGCTCCAACC TTTTATTTGC TGGTCCCCAG AATTTCAACA GTAATATCCA
TGTCAACGCC AATGCTGCCA GCAGTAGTGC CGGCGTTAAC GGTGGCGTTA ACGGTGGCGC
TAACTCTAGT GCCAACCCTC ATGCTTCCGC CAACAGCCGG TCAGTTCTCT GGGAATCTTC
CGCAAAGTTG AACCATAACC TCAACTTGCC AAATTTCAAC ATTGACCAGC TTCTGCTCCA
CGATTCTTCT AAATCTAGCA GCTATGCTCA ACTTGACTCC GGTTCAGTAT TTGGCAAGTC
CGAAGAACTC GTAAAGGCTT CGACTCAGAA TGGTCAAAGT GGTCAAAATG TTGCTCCGAA
TGTTCAGACT GTTCAAAACT CTCGACTTCA AAGCGTTCAA AATTCTGCTC AGGTTCTGAG
CGTCTCTGAA TCGTCTTCTG TTTCGTCTAC CGCCAACTCT ATACCCTCTT CAGCTGCTAC
TACCACTCCT CCTCCTCCTT CAGGAGGCTC TGTCCCTTCA ACCGCCGCTC CAGCCATTAC
TTCTGGGGCA TCTAAGAAAA TTGATAAAGA CTATATTGCC TCTATCAGCA AGGTTCCGTT
GGTTCAGTTG AAGCTGGATA TTCTCAGGCT CTCCAAAGAC CAATATGGGT GTCGTTTTCT
ACAAAAGAAA ATAGACGAGA ACTTGATTCC TAACTACCAG ACCAGACTCA ACAACTTCGA
AGTTATCTTT GCCCAGATCC ACCCTTATCT CTATGAGTTG ATTATCGACC CGTTTGGCAA
TTATTTGATC CAGAAATTGA TCGTCTACTG CAACGAGTCG AATCTTAACC TCATATTGCA
GATCTTGCAG TACAACTTGT TCCAGATCCT GATCAACCAG CATGGAACAA GAGCTCTTCA
GAAGATAATC GACAATTTGA ACAATCAGTA CCAGTTAAAT TTACTCATCA AGGGTATGAA
ACCGTACATC ATTGAGCTTA TCAAGGATCT CAACGGAAAC CATGTTATCC AAAAGATCCT
CAACAAGTAC CCACCTCTGG ACTGTCAGTT CATCTACGAC TCAATCATCG AAGGATTGTA
CGTTGTAGCT CTGCACAAGC ATGGCTGTTG CGTCTTACAG AAGTGCTTGA ACCATGTGAC
TATGACCCAG TTGCAGGAGT TCAGTGCTTG TATTTTGGAC TTTGCTAACT TCCAGTTGTT
GATCAACGAC CAGTTTGGGA ACTACGTATT GCAGTATCTC ATTCTGATCA ACTCATTTGA
GATCAACTAC AAGATCTTCC AGAACTTCTT GCAGTTTGGA ATTAACAACT TGTGCAACTT
GAAGTTCTCA TCTAATGTCG TTGAGAAGTT CTTGAAGAAT TGCTACAACA ATGAAGCTTA
CAACGGCGTA ACCGCTGTCA ACTTCTCGAA CTTAAAGATG GAGTTGATCT ACAACATCTT
GATCAACGAC TTGAACAAGC TCATCAACGA CCCCTACGGT AACTACGTCA TTCAGACCTT
GATCGACATT TTGATCAACC AGCAAGTCCC TAGTGGAAAA ATTGAAAAAT TGTCGTTGTT
GTTGCCAGCA CAGGAACCTA TTGAGGACGA TTCACAGTTG CAAGTTGTCA TAATCAAATA
CTGGTTTCTG AACTGTAAGA TCGTATCGTC CTTTGGCAAG AGGATCCAGT CCAAAATCAA
CTCTATCGTC AACGACAGAA ACCACGTGCA TTCTGTTGGA ACTAATTCGA GCAACAAGCC
ATTCCAGCAT AACATGAATC AGAACTCGTA CAGACGTAAC CTTTCCATCT CATCAGAC
|
|---|
| Protein sequence | MSHNHNLSIN LVNSLIEPTT PPNLVQRHTR STLVLSGLGG SGAVGSSVAT PFHHTKSGSL
SGSNLLFAGP QNFNSNIHVN ANAASSSAGV NGGVNGGANS SANPHASANS RGQNKIDKDY
IASISKVPLV QLKLDILRLS KDQYGCRFLQ KKIDENLIPN YQTRLNNFEV IFAQIHPYLY
ELIIDPFGNY LIQKLIVYCN ESNLNLILQI LQYNLFQILI NQHGTRALQK IIDNLNNQYQ
LNLLIKGMKP YIIELIKDLN GNHVIQKILN KYPPLDCQFI YDSIIEGLYV VALHKHGCCV
LQKCLNHVTM TQLQEFSACI LDFANFQLLI NDQFGNYVLQ YLILINSFEI NYKIFQNFLQ
FGINNLCNLK FSSNVVEKFL KNCYNNEAYN GVTAVNFSNL KMELIYNILI NDLNKLINDP
YGNYVIQTLI DILINQQVPS GKIEKLSLLL PAQEPIEDDS QLQVVIIKYW FLNCKIVSSF
GKRIQSKINS IVNDRNHVHS VGTNSSNKPF QHNMNQNSYR RNLSISSD
|
|---|
| |