Gene PICST_80864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_80864 
SymbolPOL30 
ID4851293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1429777 
End bp1430594 
Gene Length818 bp 
Protein Length259 aa 
Translation table 
GC content45% 
IMG OID640393001 
ProductDNA polymerase delta processivity factor (proliferating cell nuclear antigen) 
Protein accessionXP_001387918 
Protein GI126274279 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00590] proliferating cell nuclear antigen (pcna) 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAAG GTAAATTCGA CGAGTCCACT CTTTTGAAGA AGATCGTGGA CGCCATCAAA 
GACTGTGTCA AGTTATGTAA CTTCAACTGC ACAGAACATG GCATAACTGT CCAGGCTGTG
GACGACTCTA GAGTGCTTTT GGTTTCGTTG TTGGTGGGCC AGACTGCCTT CTCTGAGTAC
AGATGTGACA GAGACATCAC ATTGGGAATT GACTTGGACT CGTTTTCCAA GATCATCAAG
TGTGGTAACA ACGAAGATTA CTTGACCCTT TTGGCCGAGG ACTCTCCCGA TGCCGTGATG
ACCATATTCG AAGACAAGAA GAAGGAAAGA GTCAGTGAAT ACTCGTTGAA GTTGATGAAC
ATCGACTCGG AGTTCTTGAA GATCGACGAC ATGGAATACG ACACCGTCAT AAATATGCCA
TCGACCGAAT TTGCCAAGAT CGTCAGAGAC TTGAAGAACA TGTCGGAGTC GCTCAACATC
ATTGTCACCA AGGACTCCGT CAAGTTCACC TCTGAGGGTG AATCTGGATC TGGATCTGTC
GTGTTAAAGC CTTACACAGA CATGGACAAG CCTGAAGAGA GTGTCACTGT CCACTTGGAC
CAGCCAGTAG ACTTGACGTT CGGTTTGAAG TACTTGAACG ATATCATCAA GGCTACCTCG
TTGTCCGGAA CCATCACCAT CAAGTTGGCT GACAAGACCC CCGCCTTGTT CGAATATAAG
TTGGATGTTG GAGGGTACTT GAGATTCTAC TTGGCTCCTA AGTTTGATGA GGACGAGTAA
TGCATTTAGT TCTGTCTAGT ATTAATATAA TATCATTG
 
Protein sequence
MLEGKFDEST LLKKIVDAIK DCVKLCNFNC TEHGITVQAV DDSRVLLVSL LVGQTAFSEY 
RCDRDITLGI DLDSFSKIIK CGNNEDYLTL LAEDSPDAVM TIFEDKKKER VSEYSLKLMN
IDSEFLKIDD MEYDTVINMP STEFAKIVRD LKNMSESLNI IVTKDSVKFT SEGESGSGSV
VLKPYTDMDK PEESVTVHLD QPVDLTFGLK YLNDIIKATS LSGTITIKLA DKTPALFEYK
LDVGGYLRFY LAPKFDEDE