| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_80851 |
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| Symbol | VMA8 |
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| ID | 4850857 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 244004 |
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| End bp | 245015 |
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| Gene Length | 1012 bp |
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| Protein Length | 264 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | 640392565 |
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| Product | vacuolar ATPase V1 domain subunit D |
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| Protein accession | XP_001387697 |
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| Protein GI | 126273735 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1394] Archaeal/vacuolar-type H+-ATPase subunit D |
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| TIGRFAM ID | [TIGR00309] H(+)-transporting ATP synthase, vacuolar type, subunit D |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGGCG CAGGCAATCG TGAGCAAGTC TTTCCTACCC GGATGACTCT TGGGTTGATG
AAGGGGAAGT TGAAAGGAGC CCAACAGGGC CATTCGCTTT TGAAGAGAAA ATCAGAAGCG
TTGACCAAAC GGTTTAGAGA CATCACACAG AGGATTGATG ACGCCAAAAG AAAGATGGGA
CGTGTGATGC AGACTGCTGC ATTCTCATTG GCTGAAGTAC AATATGCCAC CGGAGACAAC
ATTGCCTATC AAGTCCAGGA GTCCGTACAA AAGGCTCGTT TCCAAGTTAA AGCCAAACAA
GAAAACGTTT CAGGGGTTTA CTTGCCAACC TTTGACTCTT TTATCAATGA AGAAATCAAC
GATTTCAAAA TGACTGGATT GGGAAGAGGT GGACAACAAG TTCAAAAGGC CAAGTTGGTT
TATACCAGAG CTGTTGAGAC ATTGGTGGAG TTGGCGTCAT TGCAAACTGC ATTCATCATC
TTGGATGAAG TCATCAAAGT CACCAACAGA AGAGTGAACG CTATTGAACA CGTAATTATC
CCCAGAACAG AAAACACTAT ATCGTACATT AACTCGGAGT TGGATGAGTT GGACAGAGAG
GAATTCTACC GGTTGAAGAA GGTGCAAGAG AAGAAGCAGG AAGCTCAAGC TGCTGCGGAG
CTCGAAGAGC AGGAACGTAG AGATGGTGAC GAGGCTGCTG CTATAGCTGC GGCTGAAGCC
GCCAAGGATA AGGCTGAAAC AGAGTCCCAG ATTCAGAAAC AAGTCGAGAA GTTGGACATT
GGAGTTCAAG ACGAATCTGA TATTCTCCAG GAAAATGAAG ACGATGTGAT TTTCTAGGAT
AATAGAGACT TTTTAAGATT CGAAGAGAAT GATGTTGCCA TTGCTCCTCT GCTTCTGTTT
CTCCTTGTAC GCTGGTGTAT GCCATTCATT TCTCCATACG TTTACGTTTA TTTCATGTCA
TTCAATAGAT AGTTGATTTC TATAGTACTC GTTTATTCAA TACGAAAAGT TG
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| Protein sequence | MSGAGNREQV FPTRMTLGLM KGKLKGAQQG HSLLKRKSEA LTKRFRDITQ RIDDAKRKMG
RVMQTAAFSL AEVQYATGDN IAYQVQESVQ KARFQVKAKQ ENVSGVYLPT FDSFINEEIN
DFKMTGLGRG GQQVQKAKLV YTRAVETLVE LASLQTAFII LDEVIKVTNR RVNAIEHVII
PRTENTISYI NSELDELDRE EFYRLKKVQE KKQEAQAAAE LEEQEPAKDK AETESQIQKQ
VEKLDIGVQD ESDILQENED DVIF
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