| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_80761 |
|---|
| Symbol | SSA2.2 |
|---|
| ID | 4851509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 2017433 |
|---|
| End bp | 2019611 |
|---|
| Gene Length | 2179 bp |
|---|
| Protein Length | 652 aa |
|---|
| Translation table | |
|---|
| GC content | 43% |
|---|
| IMG OID | 640393217 |
|---|
| Product | heat shock protein 70 |
|---|
| Protein accession | XP_001387622 |
|---|
| Protein GI | 126274696 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0443] Molecular chaperone |
|---|
| TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTTAGAATAG TATTTAAGTG GAGGTTGAGA CGGCGTTAGA ATCAACCTCC TGTTTTCAGT
TCCAATTGAA AACTCTATTG TTTTTACTTT TTCAAGTAGT TTTGAACATA CAGATTAAGT
ATTGTCATCA CCAAAATGTC TAAGGCTATA GGAATTGATT TAGGAACCAC ATACTCGTGT
GTGGCTCATT TCGCCAACGA CCGTGTGGAG ATTATTGCCA ATGACCAAGG TAACAGAACA
ACTCCCTCAT ACGTTGCCTT CACCGATACC GAGAGATTGA TCGGTGATGC TGCCAAGAAC
CAGGCTGCAA TGAACCCTTC TAATACTGTA TTTGATGCTA AGAGATTGAT CGGTAGAAAG
TTCAATGAGG ACGAAGTTCA GTCAGATATC AAGCATTGGC CGTTCAAAGT CATCGACAAG
GGTGGAAAGC CCAATATTCA GGTTGAGTTC AAGGGTGAAA CCAAGGTATT CACCCCAGAA
GAAGTGTCAT CTATGGTTTT GACTAAGATG AGAGAAACCG CCGAAAACTT CTTGGGAACA
ACTGTCACTG ATGCTGTTGT CACTGTACCT GCCTATTTTA ACGATTCGCA GAGACAGGCC
ACCAAGGATG CTGGTTTGAT TGCCGGATTG AATGTTTTGA GAATCATTAA TGAACCAACG
GCAGCCGCAA TTGCCTACGG ATTGGATAAG AAGGGTCAAA GCGCCCACGA GCAGAATATT
TTGATTTTTG ACTTGGGAGG TGGAACTTTT GATGTGTCCT TGTTGGCTAT AGATGAAGGT
ATTTTCGAAG TTAAGGCCAC AGCAGGTGAT ACTCACTTGG GTGGAGAAGA TTTCGACAAC
AGATTGGTCG CCCACTTCAT TAACGAGTTC AAGAGAAAAC ACAAGAAGGA CTTGTCCTCC
AACCAAAGGG CTTTGAGAAG ATTGAGAACT GCCTGTGAAA GAGCCAAGAG ATCGTTATCT
TCTTCAGCTC AGACATCCAT TGAAATAGAC TCTCTTTTCG AGGGTATCGA TTTCTACACT
TCCATCACTA GAGCCAGGTT CGAAGAATTA TGTGCTGATT TATTCAGAAC GACCTTGGAT
CCAGTTGAAA AGGTGCTTAA GGATTCCAAG ATCGACAAGT CCCAAGTTCA TGAGATTGTC
TTGGTTGGTG GATCCACTAG AATTCCAAAG ATCCAGAAGT TGGTTTCTGA TTTCTTTAAT
GGAAAGGAGC CAAACAAGTC CATCAACCCA GATGAGGCCG TTGCCTACGG TGCTGCAGTT
CAAGCTGCCA TCTTGACTGG TGATACTTCT TCCAAGACGC AGGACTTGTT GTTGTTGGAT
GTAGCCCCAT TGTCCTTGGG TATCGAAACT GCCGGAGGTG TTATGACCAA GTTGATCCCA
AGAAATGCCA CAATTCCAAC CAAGAAGTCG GAAATATTTT CGACCTATGC TGATAACCAG
CCAGGTGTCT TGATCCAAGT TTTTGAAGGT GAAAGAGCCA GAACGAGAGA CAACAATTTA
TTGGGTAAAT TCGAATTGTC TGGTATCCCA CCTGCTCCAA GAGGTGTACC TCAGATTGAA
GTTACATTCG ACATTGATGC AAATGGTATT TTGAATGTTT CGGCTTTGGA AAAGGGTACT
GGTAAGACTC AAAAGATTAC CATTACCAAT GATAAGGGTA GGTTGTCTAA GGAAGATATT
GAAAGAATGG TCAACGAGGC TGAAAAGTAT AAGGAGGAAG ATGAGAAGGA ATCATCCAGA
ATTGGTGCTA AGAATACCCT TGAATCTTAT GCATATTCTT TGAAGACCAC AATCAATGAT
GGCGAATTGA AGGAAAAGAT TCCAGCTGAC GACAAGGAGA AGTTGCAAAA GGCTATTGAT
GAAACGATTT CCTGGTTGGA CGAATCACAA CAGGCTACAA CTGAAGAGTA CAATGACAGA
CATAAGGAAT TGGAATCAGT TGCAAATCCA ATAATCACAG CAGCCTACTC CGCTGCTGGA
GGTGCTCCAG GCGGTGTTCC AGGTGGTGCT CCAGGCGGAG GAGCTCCAGG CGGTTTCCCA
GGAGCAGGTC CCTCGCAGGA CTCATCTGGA CCAACTGTGG AAGAAGTTGA CTAAATTGGG
TAGGTTTTTG TAGGATTAAG ATTAAAATTT TTTTATAGGT TCTATCGTGT TTTCATAAAT
GAATAACAGT TATTTACAA
|
|---|
| Protein sequence | MSKAIGIDLG TTYSCVAHFA NDRVEIIAND QGNRTTPSYV AFTDTERLIG DAAKNQAAMN
PSNTVFDAKR LIGRKFNEDE VQSDIKHWPF KVIDKGGKPN IQVEFKGETK VFTPEEVSSM
VLTKMRETAE NFLGTTVTDA VVTVPAYFND SQRQATKDAG LIAGLNVLRI INEPTAAAIA
YGLDKKGQSA HEQNILIFDL GGGTFDVSLL AIDEGIFEVK ATAGDTHLGG EDFDNRLVAH
FINEFKRKHK KDLSSNQRAL RRLRTACERA KRSLSSSAQT SIEIDSLFEG IDFYTSITRA
RFEELCADLF RTTLDPVEKV LKDSKIDKSQ VHEIVLVGGS TRIPKIQKLV SDFFNGKEPN
KSINPDEAVA YGAAVQAAIL TGDTSSKTQD LLLLDVAPLS LGIETAGGVM TKLIPRNATI
PTKKSEIFST YADNQPGVLI QVFEGERART RDNNLLGKFE LSGIPPAPRG VPQIEVTFDI
DANGILNVSA LEKGTGKTQK ITITNDKGRL SKEDIERMVN EAEKYKEEDE KESSRIGAKN
TLESYAYSLK TTINDGELKE KIPADDKEKL QKAIDETISW LDESQQATTE EYNDRHKELE
SVANPIITAA YSAAGGAPGG VPGGAPGGGA PGGFPGAGPS QDSSGPTVEE VD
|
|---|
| |