| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_80709 |
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| Symbol | RPB3 |
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| ID | 4850947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 527781 |
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| End bp | 528854 |
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| Gene Length | 1074 bp |
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| Protein Length | 315 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 640392655 |
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| Product | 45 kDa subunit of RNA polymerase II |
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| Protein accession | XP_001387335 |
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| Protein GI | 126273908 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CGTGCATCTA AAATGGAGGT CGACAAGTCT GACGGTCCGT CAGTGACCAT CAGAGAATCT
GAGCGTGATC ACGTCAACTT CATTCTCCGA GATGTCGATA TGGCCATGGC CAACTCTGTG
AGAAGAGTGA TGTTAGCAGA AGTGCCTACT TTGGCCATCG ACTTGGTGGA GATCGATGTC
AACACTTCTG TGTTAGCAGA CGAATTCTTG TCGCATCGTT TAGGTTTGGT TCCGCTTGTG
TCCGAAGGTA TTGAGAATTT GACGTATTCC CGTGACTGTA CTTGTGACAA CTATTGTCCC
AAGTGCTCTG TTAGATTAGA ACTCACAGCC AAATGTGATA CTGATTCGAC TATGAATGTT
TATGCTACAG ATTTGGCCAA GTTTCACAAC GGTTCACGTT TGGGAGATCC CGTCGTAAGA
GATGTTCAAA AGAGAGGCCC ACTTATCTGT AAATTGAGAA AGCACCAGGA GTTAAGATTG
ACTTGTATAG CCAAGAAGGG TATAGCCAAG GAACATGCCA AATGGTCTCC CTGTTCTGCC
GTTGGGTTCG AATACGATCC TTGGAACAAG TTGAAACACA CCGACTACTG GTACGAAGTC
GATGCTGACG AAGAATGGCC CAAGTCTGAG AACTGCGAAT GGGAAGAAGT GCCAGATCCA
GATGCTCCTT TTGACTACAA GGCTAAACCC ACTAGTTATT ATATAGACGT GGAAACTGTG
GGCAACTTGC CACCCAACGA AGTGGTATTG CGTTCCATAG AGACGTTGCA GAGAAAGCTT
GCTGACATCG CTATCGAATT GAACAAAGAG TCTGTAGAAG CCAGCAGCAC TGCCAACAAC
GGAGGCTTAA CTACTTATGG AAGATCCCAG TACGACAACG GTGGCGATAG TCCAGGCATG
GGAAGGACTC CCTACGGTGG CGATTCCGGC TTTGGCGGTG CCTCTTCCTG GAACGCATAG
TCTCTGTACA TTCACATACT CACTGTGTAT GTCGATTTCA CTTCTACCAC CGTTTAGTAG
TTTCAACTGT TAAATGTTTG TATCATTAGC TGTCTATAAA TAAAAGTAAT ACTC
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| Protein sequence | MEVDKSDGPS VTIRESERDH VNFILRDVDM AMANSVRRVM LAEVPTLAID LVEIDVNTSV
LADEFLSHRL GLVPLVSEGI ENLTYSRDCT CDNYCPKCSV RLELTAKCDT DSTMNVYATD
LAKFHNGSRL GDPVVRDVQK RGPLICKLRK HQELRLTCIA KKGIAKEHAK WSPCSAVGFE
YDPWNKLKHT DYWYEVDADE EWPKSENCEW EEVPDPDAPF DYKAKPTSYY IDVETVGNLP
PNEVVLRSIE TLQRKLADIA IELNKESVEA SSTANNGGLT TYGRSQYDNG GDSPGMGRTP
YGGDSGFGGA SSWNA
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