| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_80611 |
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| Symbol | SPT7 |
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| ID | 4851522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2053276 |
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| End bp | 2057085 |
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| Gene Length | 3810 bp |
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| Protein Length | 1106 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640393230 |
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| Product | transcription factor, member of the histone acetyltransferase SAGA complex |
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| Protein accession | XP_001388019 |
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| Protein GI | 126274742 |
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| COG category | [B] Chromatin structure and dynamics
[K] Transcription |
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| COG ID | [COG5076] Transcription factor involved in chromatin remodeling, contains bromodomain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.538787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.471232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GAAACAGCGT GGAAACATCC ATATATCAGC TTGCTTCGTT TTTTCTTGCC ATTTCAGCTC
TCTTTTTAGC TGGTTCCGAC GCTCTCCTCT GTAGAGCTAA TATTAATCTC GAGAATCAGA
TCTCTCATTG AATCCAGACT GAGTCCACAA CGATTCCTTT AAAAGGATAT TCAGAGCAGA
TAGACGTGAG TTCAAGTCTG GTAGAGTTGA CAATCCATAC ACGTGATTCA GTAGTGATTC
CAAATTTGAA TAGAAACCCA ACTAGGTTTC ATTCTTTCAT TATTTTATAT TCTGTTCACA
TTTTTCAATA ACATTTTCAG TAATATTCAC GAATTTGTTC TTCTTGAAAG TTCACAGAAA
TTCCAATCCT TCTAAAGTTG ACTAATTATC ACAGTTCCAT TTCCGAAGTG AAATTTCAGA
ATTTCTTAGC ATAGAATGGA GAAGCTATCG ACGTTTGAGC ATAACAATCC CAAGAAGCTC
TTCGAGTTGG CCAAACGGTT GCATTCCAGC AACTTCTTCG AGTCGTATCT CAACGAAACT
CATCTCAAAG TGTTGGACTA TATAATACTG TTGAACAACG CCGAGATTTG GGACAATTTC
CTTGAGGGTA ACTGTACTAT CACATTCAGC AAGGATCCAG AAGCCAGCGA GGTGGTCAAG
TCTGAAGAAG GTATTGCGGA CAATAATGAC AATGTAAGCG ACACTCCAGA GCTTCTTTTT
GAAGAAGGAT CCAAAATGGT TAAGATGTTA GCATTACATA TCAGATACTT GTTATGGGAG
AAAGCAATTG ACTACTACTA CAAAAACACA GGCTCTTCAT CAGAACAAGT AGTAGAAGTA
GATGATGACT TTGAAATGAT AGATACGCTA GATAACTTCT CGGATGACGA AGATAAGGAA
AAAGAGGCCG AGAAAGAGGA AAAAGCACAG CCAAAAGTCC GTGAAGTTGA GGACGATTAT
GACGATGAAG ACGAAGAAGA AGAAGAAAGT GACCAAAAAG ATGATAAGGA TGACAATAAA
GACAATGAGC AATCTGAAAA TGGAATATAT CAATGGAAAT ATAACGACGA AAAACAGATT
GTTTTGCAAG TGCCTGTTTC GCTTGTTACT GTGGCTCCAG ATACTTCTTC TGAAATACAA
ACAGAATCGC AAGATGGCTC TGGTTCAACT GGAAGTGAGC CTCCCAAGTC TTCATCTAAC
GGTGATTCTC CTGATTCAAA TGCTGACGAC CAGGAAAAGC TCATAAGAGA ATATAATAAA
GTGTATCATA ACTTCGAGTA CGATCGTGAA ACATTAATCA AAAGAAGGAA GTTAGAGAAG
TCGGATTTGC AGTTAGAAGA CTCCAAGAAC GGCAACGCTG ACTCTACCAA AGATGGGCTT
TCTGGATTAG GTGAAGCTGA TAGCATGGGA ATCAGTTTAG GAACTGGAAG CACTTCCTTA
AAGCATCTTT TGTCCACTAT TCAGCTGAAG AGGGACGATG TTCCTCTTAA CGATCATGAA
TTGAGAACTC TTTTTATGGA TGTAAGAAAG AACCGAGGTA AGTGGGCCAA TAACGATCGT
GTTGGCCAAG AAGAGTTGTA TGAAGCCTGT GAGAAAGTGG TTGTAGAATT GAGAGGATCC
ACAGAGCATT CGACTCCTTT CTTGAATAAA GTATCCAAGC GAGAAGCTCC TAACTATGGA
CTCATAATCA AGAAACCAAT GGACTTGAAC ACGGTGATGA AAAAGTTGAA ATCGTTCGCC
TATAATTCGA AACAGGAGTT TGTGGACGAC CTCATGTTAA TCTGGTCCAA CTGCTTGACA
TACAATACAG ATCCTAAACA TTTCTTACGA GCTCATGCTA TAGCCATGCA AAAAAAGACA
TCCAAATTAA TTCCTACGAT TCCCAATATA ACCATTAGGA GTAGACAAGA AGTCGAAAGA
GAAGAAGAAC TAGAAAACGA AAGAGTAGGA ACTCCTATGG CTTCGGCAGG AAAGTCTATG
AAAAAAGGAA GAAAGAGAAG ACAGGACCAA ATCAAAACAG AAGTAGATCC AGCTACACCG
ATAGCCACTG CTGTTGCATC TGCTATTGGC TCACCAGTGC CTGTAACAGG AGTTTCTGAA
AATATAGTAG AAAATGGAAA TGTATCCAAC GATGAAGAAG AAGAGGAGGA AGAAGATAAT
GAGAATATAA ATGGGGAAGC TAATGGAATC TCAGAAGAAG ACGACGAGTT AGATCCCGAG
CTTCAGGCCT GGAGAACTAT TACAGCAAAA TCTCGTGCTC ATTACTGTGC TGAGAGGGCT
GCCCTTTTTG ATGAGAAATT CCACTTACGG TCAGATGCCA GAGCGATAAT TCGTCAATCT
CGTGAAATGA GCAACTTCAA CCAGTATTTG ACGAACAAAG AGGTCATCTC CAAGTCGAGC
AACTTGTTGG AAAATGACGA GCCGTATCTA TTAGAATATG ACATCACTGG GGGATTGCCT
GGTCTCAAGT ATAAGGGTAT TGATAAGGAA GAAGAAGAAA AGAGAGAACA ATCGTTGGTA
GATGTTTTTT TGCAACAGGC TAATGGAGAT GCATCTAATA TCAAATCAGA TTTCGTGTTA
CCCATAGACT CAGGCTTGAA CAAGATGTAC ACCGAGAATA TCAAGGAGAT GCAAGAAATC
CGCAAGATCT GCTTCAAGAT CTCGCTTATT CGACAGATGC AAACGCAGCA ATTTGTTCAC
CATACGCAGA TGAAACAACC TGAGATTGAG GTAATACGAG AAGTAGATGT AGATGCCGTT
TCCAAGTTGC CCAACCATGA TCCGTTTACG GACCAAATCC AGTTTTCGGT GCTTCGTAGA
AATATAGCGA AGATAGCGAT GCAGACGGGG TTCGAAAGTT CTGAACCGTT TGCTATTAAC
ACCTTGACCC AAGTAGCAGA AAAGTACATG GGCAACTTGA TCAAGACGTT GAAGTTGCAC
ACAGAGACCA GCTCTAACAA TAGATTGAAC GAAAAAGAGA TAGTGTTGCT TTCGTTGTTG
GAAAACGGTA TAGACAAACC GGATGACTTG TACACTTTTG TGCAAGAAAG AATCATCAAA
CAGCACGATA AACTTACAGA TTTGCGATCA AAGTTGTCGA ATTTCTTAAA GGAGTTGTTA
CGACCTGGAT TGGAGAATTT CAATGAGAGA AGTTTTGAAG ATAATAGTGA GCAGTTCATG
ACGGGAGACT TTTCGAATGA CTTGGGAGAT GATTTCTTTG GATTCAAGGA GTTGGGTTTG
GACAAAGAGT TCAAGATGTT GAGCTCATCG ATTCCGATCT ACTTGTTACA TTCACGTTTA
CACAACTCGT TCACCAACTC TGGCAGTGCC AGCAAGAGAA ACAAGTACGA AGATTTACAG
GAGTACACAG CTCAGTTCTT GACAGCTGCA GACGTACACA AGCAGGTAGG CTTATTGAGA
CCGTTCTATA GCAAGTTGAA TGAAAAGTCG AAGGCGCATT TTGTCAAGCT TCAGAAGAAG
AAGGGAGAGC CTACAGATTT GCCAGAGGAT AACCTGTTGG TCTTGATAGA AGACGAAGAG
TTGCCCCAGA AACAGCGGAA TATCAGGCCC AGATTACCTC CCACAGGAAA GATTACTGCC
ATCAAGAAGA AGATAGTAGC CAACTCCTTT TTCTTGTCAG ACGACGAAGA TGAGGAGAAT
GGAGCCAAGA CGGAGGATAT CAAACTCGAC GATCTTGCCA TAGATAAGAC CGATAGCTTA
GGGATGAGCT CGCCGGCGTT GGCACTGGAG GCATAGCATA GAATGTATAT ATATAGCTGT
ATCACTAAGA ATAGAGACGA ATGAATTGAT
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| Protein sequence | MEKLSTFEHN NPKKLFELAK RLHSSNFFES YLNETHLKVL DYIILLNNAE IWDNFLEGNC
TITFSKDPEA SEVVKSEEGI ADNNDNVSDT PELLFEEGSK MVKMLALHIR YLLWEKAIDY
YYKNTGSSSE QVVEVDDDFE MIDTLDNFSD DEDKEKEAEK EEKAQPKVRE VEDDYDDEDE
EEEESDQKDD KDDNKDNEQS ENGIYQWKYN DEKQIVLQVP VSLVTVAPDT SSEIQTESQD
GSGSTGSEPP KSSSNGDSPD SNADDQEKLI REYNKVYHNF EYDRETLIKR RKLEKSDLQL
EDSKNGNADS TKDGLSGLGE ADSMGISLGT GSTSLKHLLS TIQLKRDDVP LNDHELRTLF
MDVRKNRGKW ANNDRVGQEE LYEACEKVVV ELRGSTEHST PFLNKVSKRE APNYGLIIKK
PMDLNTVMKK LKSFAYNSKQ EFVDDLMLIW SNCLTYNTDP KHFLRAHAIA MQKKTSKLIP
TIPNITIRSR QEVEREEELE NERVGTPMAS AGKSMKKGRK RRQDQIKTEV DPATPIATAV
ASAIGSPVPV TGVSENIVEN GNVSNDEEEE EEEDNENING EANGISEEDD ELDPELQAWR
TITAKSRAHY CAERAALFDE KFHLRSDARA IIRQSREMSN FNQYLTNKEV ISKSSNLLEN
DEPYLLEYDI TGGLPGLKYK GIDKEEEEKR EQSLVDVFLQ QANGDASNIK SDFVLPIDSG
LNKMYTENIK EMQEIRKICF KISLIRQMQT QQFVHHTQMK QPEIEVIREV DVDAVSKLPN
HDPFTDQIQF SVLRRNIAKI AMQTGFESSE PFAINTLTQV AEKYMGNLIK TLKLHTETSS
NNRLNEKEIV LLSLLENGID KPDDLYTFVQ ERIIKQHDKL TDLRSKLSNF LKELLRPGLE
NFNERSFEDN SEQFMTGDFS NDLGDDFFGF KELGLDKEFK MLSSSIPIYL LHSRLHNSFT
NSGSASKRNK YEDLQEYTAQ FLTAADVHKQ VGLLRPFYSK LNEKSKAHFV KLQKKKGEPT
DLPEDNLLVL IEDEELPQKQ RNIRPRLPPT GKITAIKKKI VANSFFLSDD EDEENGAKTE
DIKLDDLAID KTDSLGMSSP ALALEA
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