| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_80311 |
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| Symbol | SEC31 |
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| ID | 4851057 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 837981 |
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| End bp | 842128 |
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| Gene Length | 4148 bp |
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| Protein Length | 1244 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 640392765 |
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| Product | component of the COPII coat of ER-Golgi vesicles |
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| Protein accession | XP_001387795 |
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| Protein GI | 126274043 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.812288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ACACAATCCA GTGCACGACA CAGGCGAGAC TCCAAACATA CCAGCACAAG CCTGTGACGC
GAACCCTGCT CGCGACTTTT GTCTGAACAT TCTCAATTGA CTCTTAGTCT TCTCTTCTAG
TGCTCAAAGA TATAATACAA AAGACATAGT ACTATTAGCA CGCCAGGATA TATATAGGTA
AGAAAAATGG TCAAGATCTC TGAAATCGCT CGAACTTCGA CGTTTGCTTG GAGTCTGGAT
ACTTTACCTA TTCTTGCCAC TGGGACCGTT GCCGGAGCCG TAGATGCTAG CTTCAACTCT
CTGCTGCTGT TGGAACTCTG GGACATTTTT TCAGCTACCA ACACCAACGA GCCCATTTTT
AGTGCAGCTG TAGAACACCG TTTCTACGCT TTAGCATGGT CGAAACCGTT TGAAGGACGT
CCCAGGGGTT TGATTGCTGC TGCCTTTGAG AACGGAGTGA TCGAGTTCTG GGATGCCGAA
GTTCTCATCA TACTGAAAGA CTTGGCCAAA GCTTCCGTCC ACAAGCTGAG CAAACACTCT
GGACCCGTCA GAAGTTTGCA GTTCAACCCT CTTCAGAGTC ATGTGTTGGT TTCCGGAGGA
TCTCACGGCC AGATCTTCAT ATGGGATACA AAGAAGTTCA CCGAACCCTT CTCTCCGGGA
CTGGCTATGA CTCCTATGGA CGAAATCAGC TCCGTAGCCT GGAACAACTC GGTCAGCCAC
ATTCTCGCCA GTACAGGAAA TAGTGGCTAC ACGTCGATCT GGGACTTGAA ATCAAAGCGA
GAAGTGTTGC ACTTGTCGTA CACTGGTGCA TCAGGAAGAG CCAACTTCTC CCATGTTGCT
TGGCATCCTA CTAAGCTGAC CGAATTAATC ACCGCCAGTG ACAATGATGC CTGCCCATTG
ATATTGACGT GGGATTTACG TAACTCCAAC GCTCCAGAGA AGATCTTAGA AGGGCACAAG
AAGGGAGTTT TGTCGCTTGA CTGGTGCCAA CAGGATCCGG AGCTCTTGAT CTCCAGCGGA
AAAGACAACA CAACTTTCTT GTGGAACCCT ACTACTGGAC AGAAACTTGG TGAATACCCT
ACTACAGCCA ACTGGGCTTT CCAAACTGCT TTTGCACCAA AAGTTCCTGA TATCTTTGCC
ACAGCTTCGT TTGACGGCAA GATCGTCGTG CAGTCGCTCC AAGATACCTC TCCTCCAGTG
TCGGAAAAAG TCACATCCAA CGATGACAAC GTCTTCTGGA ATCAGTTGTC TACAACTGAC
ACCCAGCAGC CGGTATTTGA TATCAAACAG GCTCCTCAGT GGTTGAAGAC GCCTTCTGCT
GTGTCATTTG GCTTTGGTTC CAAGTTGGTG CAGGTGCTGA AAGACAGCAA CGGCAAGTCC
ATTATCAATA TCCAAAAGTT TGTCGCCAAA GGACAAAGTT CATCATCTGA ATTATATACT
GCTCTCAAGA ACAACAACTT CAAATCAATC ATAGACGAGA AGATCTCGTC GAACGTTGCC
AGCGACCTTG ACAAGAGCGA CTGGAAGCTC TTACAGAAGT TGGCTGAATC CGGAAAGGAT
GAAATCTTGA CTGAGGTTAC TACAGAAGAA GAAGAAAAGA AGCCAGAAAC TGAAATTGAA
CTGGAAGATA AGAAGAACGG TGATTCTGAA GACGTTCCAG CTTCTGCTGA TGATTCCTTC
TTTGACAATC TTGGAAACGG CAAGGTAGTT CTTGAAAATG AAGCACCTTT TGTTCCATCG
GGTTCGTTCA AGATCTTTTC CGCCAAAGTC AGCGAAGAGG ACAAGTCTTT GATCAAATTG
GTTTTGGGCA ACAAAATCGA AGATGCCGTC CATGACTGTA TCGAAAGAGG CAAATTGTTG
GAAGCATTGG TGTTGGCCTT GGATGCTTCT GATGACATCA AGGAAAAAGT TAAAAACGCC
TACTTTAAGA AGAACGTCAA AAAGGAAGTG TCGAGAGTTC TCTATTCGGT CTCATCGCAG
AATATCACCG ACATTGTATC CAACGCCAAT GTAGCCAACT GGAAGGAAAT CGCTGCTGGC
ATCACCTCCT TCACCAACGA TCCGGACGAT TTTAACAGCA AGATCACCGA GTTGGGTGAT
CGTATCTTGG AATCGAAGAC TGTAGCTGAT AGCAGAGACA CTGCCATCAG ATGCTACTTG
GCTGGTAATG CTTTGGACAA AATTGCAAGT ATCTGGTTGA AGGAGTTGCC AGCCTTGGAG
GCTCATTTGT TGGAGTCCGA CAACGCTGAA AACGTCTCAT CTCCTTCCGA AGCTCGCCTC
ATCGCTTTGA CTAACTTTGT TCTGAAGATT GCAGCCTACA GATCGATTTC TAACATCAGC
GGCGAGATCT CTGGCCCTTC AGCTGAACCT ATCTCCAAGG CTATTGTAGA GTACACAAAT
TTGGTAGCTG GTAACGGAGA GTTTGAATTG GCCAACATAT TCTTGCAATT GTTGCCCAGT
GACTTGGCAG GAACCGAAAA GGACAGAATC AACAAGGCTA CTGGTGCCGT TGCTGCTGTT
ACTGCTTCCA AAACTGTGAA ATCTGGCACA AGCGCTGTTG CTAACTCTGT CACCGCTAAG
ACTAGCAAGG TTTCGAGAGG TCCTTATGGT AGGACGACCC CAGTGATTCC AGAAGTCCTG
TCAACTCCAA AACCTTCGTA CCAGGCAACG ATGCCTCCTA TTGGAGCTCC ACTTGCTCCC
TCAGCTATTC CATCTGCCAG TGTTCCAAGC AGCAATCCAT ATGTCAGAGC TTCTAACCCA
TATGCTCCTC ATGTGTCCTC AACCAACATC TACAAACCTG CTGCTCCAGT CGTACAAGCA
CCACCTCCAG CCCAAGCTAC AGCAGTAAGT CCGCCTCCTA CTGGCCCACC TAAGCCGGTA
TACAAACAGG AAACTGACGG TTGGAACGAT TTGCCAGATA CGTTCAAATC GAAGGCTCCA
GCACGCCGAG CTGCTGCTGT TGTTACAGCT ACACCATCTC CTACACCATT ACCTCAAACT
ACAGTTCCAC CAATGTCCAT TCCTCCAGGT CCGAAGAGAT CGATGTCAAG CGGAAGTGCT
GCTCCTCCTC CACCAAAAGG TAGCCGTGCT AATTCTAAAG TAGCTGTACC CACTATCCAG
TCGTCACCAC GTCCTGCTCC TGTTCATGTT AACAATCGTT ACGCTCCACC TCCTTCAGCA
GATGTGAATG CTCCGTCCAA CACTCACTCT TCTCCAGTAG GAGTATCTCC TTCTACCAAG
AAGAACCCGT ACGCTGTAGC ACCAGAGGTA GCTCCTAGAG TAGCCTACGC TCCTCCTCCA
GCTTCTCTTT CAGGATTAGG ATTCTCCGGA GGCGCTGCTG CACCACCAGC ACCCCCAAAG
AATCCATATG CTCCTCTGGC CAGTTCTGTA ATTTCTCCTA GAGTTAGCAA CGCTGGTATA
GTACCACCTC CTATGGGTAG AGGCATTGTA TCTCCTCCAA CTTCGTTTGG CTCAATGCAC
GCAGCCCCTA TTCAGCCAGC TTTTAGCGGA GTCCCACCAC CACCTCCAGC TATCGGGCAC
CAGCCAGCTG CTTCTGCCCC TCCTCCTCCT CCGGCAGCTA AAACTCCAGT TCCAACCAAG
AGTAAATATC CCAAAGGAGA CAGGTCTCAC ATCCCCGAAA AGTCGGTTTT GATCTACCAA
TATTTGACCA AGGTGCTTGA GGCTGTCAAG CCTAACATCC CAGAAAAGTA CACGGCTCAC
GGCGAGGACT TGGAAAAGAG ACTCAACATA TTGTTTGACC ACTTGAACAA TGAAGACTTG
TTAACCGACG ATGCCATTGA AGACTTGAAG GAAGTTTGCA CAGCATTGGA AAGCAAGGAT
ATTGAATCTG CCAGCTCATT GAACACTCTG TTTGCTGCCA ACCATATCGA TCAACTCGGT
AATTGGCATA GAGGTATCAC CCGTCTCATT ACCATGGCTG AAGCTATGTA TTAGCGCAAA
ATAACTTTTT TTAATGTATA GTCATCTCCA CTCGGTGCAT TATTAGATAT GCTAACTATG
CCTACCATAG AAATAACTAA AATGATTTTT GTCAAGTTTC TAGACATGTA CAAATATAGT
AGAGTCACCC CTAAAAGATT ACAACATTGT CTAAAAATGT TGTAGAATAG ACATTTTGTT
AACGTTAG
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| Protein sequence | MVKISEIART STFAWSLDTL PILATGTVAG AVDASFNSLL LLELWDIFSA TNTNEPIFSA
AVEHRFYALA WSKPFEGRPR GLIAAAFENG VIEFWDAEVL IILKDLAKAS VHKLSKHSGP
VRSLQFNPLQ SHVLVSGGSH GQIFIWDTKK FTEPFSPGLA MTPMDEISSV AWNNSVSHIL
ASTGNSGYTS IWDLKSKREV LHLSYTGASG RANFSHVAWH PTKLTELITA SDNDACPLIL
TWDLRNSNAP EKILEGHKKG VLSLDWCQQD PELLISSGKD NTTFLWNPTT GQKLGEYPTT
ANWAFQTAFA PKVPDIFATA SFDGKIVVQS LQDTSPPVSE KVTSNDDNVF WNQLSTTDTQ
QPVFDIKQAP QWLKTPSAVS FGFGSKLVQV LKDSNGKSII NIQKFVAKGQ SSSSELYTAL
KNNNFKSIID EKISSNVASD LDKSDWKLLQ KLAESGKDEI LTEVTTEEEE KKPETEIELE
DKKNGDSEDV PASADDSFFD NLGNGKVVLE NEAPFVPSGS FKIFSAKVSE EDKSLIKLVL
GNKIEDAVHD CIERGKLLEA LVLALDASDD IKEKVKNAYF KKNVKKEVSR VLYSVSSQNI
TDIVSNANVA NWKEIAAGIT SFTNDPDDFN SKITELGDRI LESKTVADSR DTAIRCYLAG
NALDKIASIW LKELPALEAH LLESDNAENV SSPSEARLIA LTNFVLKIAA YRSISNISGE
ISGPSAEPIS KAIVEYTNLV AGNGEFELAN IFLQLLPSDL AGTEKDRINK ATGAVAAVTA
SKTVKSGTSA VANSVTAKTS KVSREVLSTP KPSYQATMPP IGAPLAPSAI PSASVPSSNP
YVRASNPYAP HVSSTNIYKP AAPVVQAPPP AQATAVSPPP TGPPKPVYKQ ETDGWNDLPD
TFKSKAPARR AAAVVTATPS PTPLPQTTVP PMSIPPGPKR SMSSGSAAPP PPKGSRANSK
VAVPTIQSSP RPAPVHVNNR YAPPPSADVN APSNTHSSPV GVSPSTKKNP YAVAPEVAPR
VAYAPPPASL SGLGFSGGAA APPAPPKNPY APLASSVISP RVSNAGIVPP PMGRGIVSPP
TSFGSMHAAP IQPAFSGVPP PPPAIGHQPA ASAPPPPPAA KTPVPTKSKY PKGDRSHIPE
KSVLIYQYLT KVLEAVKPNI PEKYTAHGED LEKRLNILFD HLNNEDLLTD DAIEDLKEVC
TALESKDIES ASSLNTLFAA NHIDQLGNWH RGITRLITMA EAMY
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