| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_80234 |
|---|
| Symbol | PPM2 |
|---|
| ID | 4851048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 807314 |
|---|
| End bp | 809664 |
|---|
| Gene Length | 2351 bp |
|---|
| Protein Length | 692 aa |
|---|
| Translation table | |
|---|
| GC content | 40% |
|---|
| IMG OID | 640392756 |
|---|
| Product | carboxymethyltransferase |
|---|
| Protein accession | XP_001387384 |
|---|
| Protein GI | 126274034 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.363907 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCAA AAAGCAAGCC CGAATTAGAC GCTAGTCAAC TAGCGAGACA AAGAAAGAAG
ATAGAGAAAG ACAGAAGACG AAAGCAATAT GATGATCTCC AAGTCCAAGG AACCAACAAC
TCTTCGATTG TTTCCAAGAG AAGTGTAGAA ATGTTATATA CCAATAAACT AGAACCTGAA
ATGGGTGAAT GGTTTAAGCA TTTTGTGAAG AAGGGAAAGA GAAGATCACC GGCAATCAAC
AGAGGTTACT GGATTAGAAT GGAGACTATC AAACAAATGG TAACCAGAAT TATAAAGAAC
AACCCCAACA AAAAAGTACA CATTATAAAC TTGGGCTGTG GATTCGACCC CTTGCCCTTT
CAATTGCTCT CATTATCCAA GAACAAGGGA GAGAACGTTG ATTTGCATTT TATTGACATA
GACTATCCAG ATTTAGTGCA GAACAAGTTG AAAATGATCT ACGATTCTCC AGAGATACTT
GAGGTTATCG GAGAATTGCA GAATCCAGAA AAGGATTTAG GATTATTCAT AAGTGCCGAA
AAGTACAAGT TAGTAGGGTG TGATTTGAAA GACACTACGA GATATCAGAA GCAACTAGAC
TATTTAGTTG GTACTTCTTC TGATTCAATC AAAATATTTG TTGCGGAGGT TTCATTAGCA
TACATGAAAC CTGAGTTCGC AGATCCCGTT ATAGACTACT CTTCCAGAGT ATCAAACTCC
CACTTTCTTA TTCTCGAACA GATCTTACCA AACACAGAAT TCAACGCGTT TGCAACCAAA
ATGATGTACC ATTTCAACCA CTTACGAAGT CCTTTACAAT GCGTTCAAAC ATACCCTTTG
AAAGAAGATC AAATCACAAG GTTCAACAGA TACTATCCGC TAGCTGAAGT TAGAAACCTC
TTTGAAAATT GGTTATGCTT AATCGACGAC AATATGAAAG AGAGAGTAGA ACACATTGAA
GAATTCGATG AATGGGAAGA ATTTATAATC TTCTGCCAAC ATTATGTCAT TGTCCATGCA
ACAAATATGA AAAAAGACCA ACTTATTTAT GCAGACTCTG ATTCTCACCA AGCAGTGAGT
CATGATTATG ATTTCGATGA CAACGTTAAA TTAACTTTAG ATACTAGAGC CAACCCTGAA
TTTCTCGAGT TAAAGTTTCC TGCGATAACA ACAATAAGCG GCAACCAGAT TCTCGTGCAT
GGAGGTTTAC GTCAAACTAG ATCTAATTTG CTGTATATTT ACGATAGCGT TAATGGGAAC
GTAAGCGAAA GAATCTTTAC TGGTGAGGTT CCACCACGTA TGTGTCATAC ATTAACTGCC
TTGCTGGATA CGACATGCGT CTTGATTGGT GGCAGAACTA GGCCTGGCAT GGCTCTAAAC
GATACCTATA AGTTGCAAGG CGATGAATGG GTGAAATTGA AGGATATTCC AAATGGTAGA
TGCAGACATG CTGCCACTAG ACTTAGTGAG AGTGAAGTGT TGATATTCGG TGGATTGCCA
GAAAATAAGG AACATTGTGG GGCACTGCTT TTCGAGGTTT ATGACATCAA TATGGAGGAA
TCTAGACCGT TGAAAATTGT GCAGAACGGA TCTGAAGCTA CGATCGCCAA CTTGAAGAGT
TGTGGTATTG CCTACAACGG GCAGTATGGT TTAATTATTG GCGGGATGGA GAAAGAGACT
GTTCCTACTG TTAATAATCA AATATATAAA TTCACCATTG GAGAAGACAG ATCCAGTATT
CATATTACGT CTGTTGCGCA AGGTGACGTT TGGATGAGAA TAGGTTCACA GGTGCAATTC
GTTGGAGAAA ACAAGGTAGT AGTCATCGGA GGCATTTCTC CTCGGCACGT GTTCTCCAAC
TTTAGTAATA TAGTGACGTA CAACGTTGAA ACTCAAGAGA TACGCTGTGT TGAAATTCCT
GAATCCATCA CCAAAACCAG TCCGCCTATC TTTATTGGGT TTGGAAGTGG AGTGTTGGTT
GACGAGAAAG GCAGGAAGAG TATCGCATTA TTGGGTGGAG GGGCAGTTTG CTACTCTTTT
GGCAGCTGCT ACAATGGTGT CTACCGGCTT GAATTATGAA ACAAGCATTG AAGGCTGAGT
ATTGACATGT GACAATATGG TGTAAAGCTT TATGTTGACG TGCAATTAGA GAAAATGTTG
CAACACGAAA AGCAGCGGTA CGTCACACGG CGCACTGCGT AAAAGTTGCA GCCATCGGGA
AAACGCACTT TGCCCGCGTG AGAAAATACT CACTATTTGG TAGGCTCTGA TAGATTAACG
AGAGAATATA GAAATCGTTT AGATATGTCG GGGTGTACAC CCAGAAAATA AAGCATTCCA
ATAAGCGATG G
|
|---|
| Protein sequence | MTAKSKPELD ASQLARQRKK IEKDRRRKQY DDLQVQGTNN SSIVSKRSVE MLYTNKLEPE
MGEWFKHFVK KGKRRSPAIN RGYWIRMETI KQMVTRIIKN NPNKKVHIIN LGCGFDPLPF
QLLSLSKNKG ENVDLHFIDI DYPDLVQNKL KMIYDSPEIL EVIGELQNPE KDLGLFISAE
KYKLVGCDLK DTTRYQKQLD YLVGTSSDSI KIFVAEVSLA YMKPEFADPV IDYSSRVSNS
HFLILEQILP NTEFNAFATK MMYHFNHLRS PLQCVQTYPL KEDQITRFNR YYPLAEVRNL
FENWLCLIDD NMKERVEHIE EFDEWEEFII FCQHYVIVHA TNMKKDQLIY ADSDSHQAVS
HDYDFDDNVK LTLDTRANPE FLELKFPAIT TISGNQILVH GGLRQTRSNL LYIYDSVNGN
VSERIFTGEV PPRMCHTLTA LLDTTCVLIG GRTRPGMALN DTYKLQGDEW VKLKDIPNGR
CRHAATRLSE SEVLIFGGLP ENKEHCGALL FEVYDINMEE SRPLKIVQNG SEATIANLKS
CGIAYNGQYG LIIGGMEKET VPTVNNQIYK FTIGEDRSSI HITSVAQGDV WMRIGSQVQF
VGENKVVVIG GISPRHVFSN FSNIVTYNVE TQEIRCVEIP ESITKTSPPI FIGFGSGVLV
DEKGRKSIAL LGGGAVCYSF GSCYNGVYRL EL
|
|---|
| |