Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_80114 |
Symbol | |
ID | 4851434 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 1805749 |
End bp | 1806836 |
Gene Length | 1088 bp |
Protein Length | 297 aa |
Translation table | |
GC content | 42% |
IMG OID | 640393142 |
Product | predicted protein |
Protein accession | XP_001387982 |
Protein GI | 126274562 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.301364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTGT GGGCGTTGTT TCGAGTCATC CTCTTGATCC GGGCGGTGCT TGCAGTCGCC AGCACTGGAT CAAAAGGCCT AAATCAGCAT ATTCGTGAAT TCGGCGATTC AGCCATTGAA GATAATCTAA AGCGAGCCAG ATATTCTCTA ATTTACTTCT ATAGAGATGC GTGTCAGTAC TGTGATAAGT TCAATCCGGA CTTTGAGAAC TTGAGCGTAC TATTCAATAA CGCTAGTGAC TCTGGGGAAG GCGAGAACAG TATTATTCAG GTTATCAAGA CGAATGGGAA GGTCAACCCC AGATTGAACC AGCTTTTCAA GGTTCAACTG TATCCGACCT TGAAGCTTTT GGACTTCAAG ACTATGGAAA TATTCACATA CACGAAAAGA AAAAGAGATA TTCTCTCATT ACTTGAGTTT GTCAAGGAAA AAGTGCCAGA CGCAAAGCCC AACTATAAGA ACTTTGTCTC CAAAGTCAAA TACTTGGATA ATGCTAGCTT TGATGACCAT GTCAAACAGC TGAAGAAGGA TACGTTGGTG GTTTTCACTA TGCCATATAT GGACGACTGG ATCAACTACC AATATCCTGC TCATTTCTAT CAGCAATTGG CCGATAGAAT GTCTAGCGAT GAACGTAACA TTCAATTCTC TCTTGTAGAT GCTGGATCCC AAGCAGCCAG TGATGTAATA GCTGGACTAA AGATCAGCAA CTTCCCATCT ATAGTCTATT TCAAGGGAGA CGGTAGAGTC AAAGCTTATG GAGTTTATGA CCAGAACCAA GTAATGCATG GGATATTGAG TGAAAAAACC TTGGACAGCT TCATAGACAA TATAGATTCT GAAGAACATG GAAAATGGTT TGAGTCTGTT GAGAAGATGG TAGAGTCCAG GGAAGAGTCT ACGGAGTACG ACGGAAACTT GCACTACAAG CCAGGATTCA ACGTGAGACA GGATAATCGA AATGGAGAGG ATGAAGAGGA GCAGTATAGA CAGCTCTTGA GAGAGGTAGA GTTGTAATGC TACAATGTAT ATAGATATCT ATACCTGGTA TATAGCAGAA GAACTTCAGG GCATATTTGA CATTTTCC
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Protein sequence | MQVWALFRVI LLIRAVLAVA STGSKGLNQH IREFGDSAIE DNLKRARYSL IYFYRDACQY CDKFNPDFEN LSVLFNNASD SGEGENSIIQ VIKTNGKVNP RLNQLFKVQL YPTLKLLDFK TMEIFTYTKR KRDILSLLEF VKEKVPDAKP NYKNFVSKVK YLDNASFDDH VKQLKKDTLV VFTMPYMDDW INYQYPAHFY QQLADRMSSD ERNIQFSLVD AGSQAASDVI AGLKISNFPS IVYFKGDGRV KAYGVYDQNQ VMHGILSEKT LDSFIDNIDS EEHGKWFEMK RSSIDSS
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