| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_75518 |
|---|
| Symbol | NUO20 |
|---|
| ID | 4851784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 2819996 |
|---|
| End bp | 2821027 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | |
|---|
| GC content | 43% |
|---|
| IMG OID | 640393492 |
|---|
| Product | NADH-ubiquinone oxidoreductase |
|---|
| Protein accession | XP_001386878 |
|---|
| Protein GI | 126275592 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.228639 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATTCGGGCCG TTTTTTTCTA AACTCTTCTC CACAAACATC CACAACATGT TCTCGTTGTC
CAGAAGAGCC TTCGTGGCCG CAAAGCCCGT GTCTAGCTCC GTAGCAAGGG CCGTAGCTGT
TCGTTACATA AGCTCCAAAG ACTTGACTCC CAAGGCTTTA CCTACAGACT TCCCATTAAT
GTCAGAAAAA ACTGCCTCCA GTCCCATCGA CTACGCCTTG ACGTCGTTGG ACTCGATTGC
TAACTGGGCC AGAAAGTCGT CATTCTGGCC AGTGACTTTC GGTTTGGCTT GTTGTGCTGT
GGAAATGATG CACGTCTCCA CTCCCAGATA CGATCAGGAT AGATTGGGTA TTATTTTCAG
AGCATCGCCA CGTCAGTCCG ATATCATGAT TGTAGCCGGA ACTGTCACCA ATAAGATGGC
CCCAGCCTTG AGACAAGTGT ACGATCAAAT GCCAGACCCA AGATGGGTCA TCTCCATGGG
CTCGTGTGCC AATGGTGGAG GCTACTACCA CTACTCATAT TCCGTTGTCA GAGGCTGTGA
TAGAATCGTC CCTGTGGACA TTTACGTTCC AGGTTGTCCT CCTACTGCTG AAGCATTGAT
GTACGGTGTT TTCCAGTTAC AGAAGAAGAT GATGAAGACC AGAATCACCA GATTGTGGTA
CAGATCGTAG AGAAGAGATT GTATGAAGAA TGAGGATTAT GTGAATGACT AAAATTAAAA
ATTAGATTGC TAAATTGTAT ACATTTTGGC AATCGATTTA GTGGATATTG GATGTTGTTC
TGATCATTAA CGATAACTTT CATATCCATA GTCATGTTGT TGACATTTAA CATATTCGCG
AATATTGTTA TCCATGCGAT ATTCTGATTC TCATTTATAT TCCTATTAGT CACTACCCTA
CACTCATAGA TATCATAGTT CACTGTCAAG GTGAGCAACA GTTTCACTTC CGATAGTAGC
CGTGTGCAAC TATCACCATT TTCCTTGCAT TGTATTCTAT ACACTTTTTA TACGTTTAAT
ATATTCATAG TC
|
|---|
| Protein sequence | MFSLSRRAFV AAKPVSSSVA RAVAVRYISS KDLTPKALPT DFPLMSEKTA SSPIDYALTS
LDSIANWARK SSFWPVTFGL ACCAVEMMHV STPRYDQDRL GIIFRASPRQ SDIMIVAGTV
TNKMAPALRQ VYDQMPDPRW VISMGSCANG GGYYHYSYSV VRGCDRIVPV DIYVPGCPPT
AEALMYGVFQ LQKKMMKTRI TRLWYRS
|
|---|
| |