| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_75393 |
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| Symbol | RPG1 |
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| ID | 4851910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 3156265 |
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| End bp | 3159005 |
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| Gene Length | 2741 bp |
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| Protein Length | 887 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | 640393618 |
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| Product | Translation initiation factor 3, subunit a (eIF-3a) |
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| Protein accession | XP_001387173 |
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| Protein GI | 126275994 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.238118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AAGTAAACAC TGTAGAAATG GCTCCTCCTC ACCATAGAAA CCACAACTTC CGTCCGGAAA
ACGTATTGAA GCGTGCCGAG GACTTGATCG CTGTGGGCCA GCGTGAAGCT GCCTTAGACG
TTCTTTACGA CTTGATTACT TCAAAGAGAA TCAGATACTT ACAAGTAGAA GACTTGGAAC
CCATTGCCCT TTTACTTATC GAGTTGGCAG TGGATTTGAG AAGAGGAAAG CTTGCCAAAG
ATGCCCTTCA TCAATATAAG AAGAATGTGC AAATGCTGGA AAACGGCTTA GAGTCTGTCC
AAGTCATTGT CAGAAGGTTC ATTGAGTTAG CCGAGAAGAA ATTGGACGAA GCCCAAGCCA
AGGCTGATAT CAGAATTGAC CAAGAGGAAG CCGACGAGGA TTTGGAGGCC GCCCAGACAC
CAGAATCGAT TATGTTATCT GCTGTTTCTA ACACTGATGC TGCTGACAGA ACCGAGAGAG
AATTGGTTAC ACCTTGGTTG AGATTCCTTT GGGAAGCATT CCGTGCCTGT TTGGATATCT
TGAGAAACAA TTCTAAGTTG GAAGTTACGT ATTCTGCCAT TGTGAATTCT GCATTCAAGT
TCTGTTTGAA TTTTTCCAGA AAAGCTGAAT TCAGAAGACT TTGTGAATTG CTCAGAGCAC
ACATGCAAAC AGTCACCACT CAGACCAAGA CTGCTACCAA CAATGCCATT GACTTGTCTG
ACACTGAAAC TGTCCAGCGT TACTTGGAGC AACGTTTTGC TCAGTTGAAC ATCTCGGTGA
AGTTGGAGTT GTGGCAGGAA TCGTTCAGAT CTGTTGACGA TGTTCACACT TTGATCACTG
CCTCTAAGAA GGCTCCTAAG GCTAACATGA TGGCCAACTA CTACGAAAAC TTGGCCAGAA
TCTTCTCTGT TTCCGGTAAC TCTCTTTTCC ACGCTGCTGC TTGGAATAAG TTCTTCAACT
TGTACTCGCA GTCACCCAAT GCTTCTGACG AAGAGTTGAA GCGTTACGCT TCTTTGCTCG
TTTTGTCTAC CTTGGCTATT CCACAAAAAG CCTTGAACAC CAACGAAACA GTCGTGGACG
AACACAAGAC CAAGAACTCC AAGTTGACGT CGTTATTGAA CTTGAACCAA GTGCCTACCA
AAGAAGGCTT GATCAAGTCT ATTACTACCA GATCCATTTT AGCTTATGTT GATGAACCCA
TCAAGAAGTT ATTCAAGCTC TTGCAGGGTG GTGAATTCCA GCCATTGACC ATCAAGTCCA
AGATTGTTGA GATTTTCCAA GTCATCGAAG CTGACAAGGA CTACAAGCAG TATGTCTCTA
CATTGACCGA AGTTATCTTG ATTAGATTGT ATCAACAAGT AGCTCAAGTC TACGAGACAG
TCAAGTTAGA CTTTTTGGTT TCGTTGGGTG TTATTGAAGG CATTGAGAAT TCTTTGTCTA
GTTTGGAAGT AGAGGACTTG ATTGTCAACG CTGTTAAGGG TGGACATTTG TCTTTAACAA
TTGACCATGA ATCCAATGTA GTTTCTTTCA AATCTAACCC ATTCGAAGAG TCTCTTGACG
ATACTACTAC TGACAAGTTG CAAGTTTCGC CAGCTGAATT AGTCAGAGCC CAAATTTCGA
AGTTAGCCCA GACATTGTCT TCTGCTGCTC TTATTATTGA TCCAGGCTTT GAGGCTCGTC
GTGAACAGGC ACGCGCTGTT GCTTTACAGA GAGCTGTCAA CGAGATGGTC AGAGAACAGC
AAGAGATTGC TGATCGTGTC CAGGTGATCG AAGAGCGTAA ACGTATTGCC GACAAGAAGA
AGCGCGAAGA AGAAGAAGCC GCTGCTCGTT TGAGACAAGA AAAGTTGTTG CAAGAGCAAA
AGGCCGAACA GGAGAGATTA GTGGCTGAAC AAGAGAGAAG AAACTTGGAG AGATTAGAAA
GAGAAAAGGA GCTCATCAGA GAACAAGAAA AGAGAAAGAT CGCCGAAGAA ATCAATGCTA
AGGGTATTAT CAAGGTTGAT TTGGATAATT TGGCCGAATT AGACACCCAA AAATTGCAGT
TGATGCAAAT CCAGCAGTTG AGCAAAGATA GAAAGGAATT GGAAGACAAA TTGAAGGGTG
TAGCCAAGAA GAGTGACCAT CTTGAAAGAG CCTTCAGAAG CTTCGAGTTG TCGCATTTGG
AGAAGGATGC CGAAGAGCAG AAGGAGCAAG AGATCAAGAA CTACGAGCTT GCCAGACAAT
CCAAGATTGC CAGAGCCAAG AAGGAGTACG AAGAGGCCGT AGCATTGAGA GACCGTTTCA
ACCGTATTGT TCCTGACTAC TCTAGCTTCA AGTCTGTTAT TGATAAGAAG AACGCCGCTA
GAGTTGCCGA GTTGAAGAAG GAGGCTGCTG CCAAGTTCAA GCAAGCTAAA CAGGAGAGAA
TCGAGAAGGT CAAGGCACAA AGAATCGAAG AGTTGAGAGT CAAGCGCGAG AGAGAAAAGA
AGGCAGCTGC TGAAGAATCT GCTAAGAAGG CTAAAGAAGC TGAGTTGGCC AAGTGGAAGG
AAGAGTTAAG AATCCAAAAA GAAAAGGATG AAGAGGCCAC CAGAAGAAGA GCTGAATTGG
AGGAACAGGC TGCTGCCGAA GCCAAGGCCA AGCTTGCCCC ACCAAAGCCA CTTACCTTCG
CTGAAAGAAT GAAGTTGAAG AGAGAAGGTA AGCTTGCTTA GACACTTATA GCATTAACTA
TATGGTACAA GACTTAGTGT TGAGAATTAT AGAAAGTATT G
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| Protein sequence | MAPPHHRNHN FRPENVLKRA EDLIAVGQRE AALDVLYDLI TSKRIRYLQV EDLEPIALLL
IELAVDLRRG KLAKDALHQY KKNVQMLENG LESVQVIVRR FIELAEKKLD EAQAKADIRI
DQEEADEDLE AAQTPESIML SAVSNTDAAD RTERELVTPW LRFLWEAFRA CLDILRNNSK
LEVTYSAIVN SAFKFCLNFS RKAEFRRLCE LLRAHMQTVT TQTKTATNNA IDLSDTETVQ
RYLEQRFAQL NISVKLELWQ ESFRSVDDVH TLITASKKAP KANMMANYYE NLARIFSVSG
NSLFHAAAWN KFFNLYSQSP NASDEELKRY ASLLVLSTLA IPQKALNTNE TVVDEHKTKN
SKLTSLLNLN QVPTKEGLIK SITTRSILAY VDEPIKKLFK LLQGGEFQPL TIKSKIVEIF
QVIEADKDYK QYVSTLTEVI LIRLYQQVAQ VYETVKLDFL VSLGVIEGIE NSLSSLEVED
LIVNAVKGGH LSLTIDHESN VVSFKSNPFE ESLDDTTTDK LQVSPAELVR AQISKLAQTL
SSAALIIDPG FEARREQARA VALQRAVNEM VREQQEIADR VQVIEERKRI ADKKKREEEE
AAARLRQEKL LQEQKAEQER LVAEQERRNL ERLEREKELI REQEKRKIAE EINAKGIIKV
DLDNLAELDT QKLQLMQIQQ LSKDRKELED KLKGVAKKSD HLERAFRSFE LSHLEKDAEE
QKEQEIKNYE LARQSKIARA KKEYEEAVAL RDRFNRIVPD YSSFKSVIDK KNAARVAELK
KEAAAKFKQA KQERIEKVKA QRIEELRVKR EREKKAAAEE SAKKAKEAEL AKWKEELRIQ
KEKDEEATRR RAELEEQAAA EAKAKLAPPK PLTFAERMKL KREGKLA
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