| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_74933 |
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| Symbol | YBU4 |
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| ID | 4851297 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1435625 |
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| End bp | 1437968 |
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| Gene Length | 2344 bp |
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| Protein Length | 696 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | 640393005 |
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| Product | Predicted tubulin-tyrosine ligase |
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| Protein accession | XP_001387504 |
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| Protein GI | 126274283 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0496] Predicted acid phosphatase |
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| TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATTAACTACA TTGAACACAT TCAGTTACCA CATGAGTCCC AGAAGACTCT CCATATCGTT
ATTGAATCTA TACTAAACTC AGATATCTTT TTTTCAATTT TCCAGTTTCA GATTCCACAC
CAATGCACGT TCTCTTAACC AACGACGATG GTCCTTTGGA CGACAACTCA TGTCCATACA
TGAAGTACTT TGTAGACGAG ATCCTCACCA CGACTGACTG GGACCTCTCG ATTGTTGTAC
CGAACGAACA GCGGTCATGG ATCGGAAAGG CTCATTTCGC TGGAAAGACT CTAACAACTA
CATACATCTA CACCAGGCTT CTGACCAGTG CTCCCAACGC CAATATCAAT AGCTTTGAAG
GTCCCTTCAA AACTTCTCAA CCACAGTTTC CACAGCCGGA ATGGCAGGAA TGGGTTTTGG
TCAACTCGAC TCCGGCAGCC TGTGCCGATA TCGGAATCCA TCATGTCTAC AGCAAGAAGA
AGGGCCCCAT AGATCTTGTT CTCAGTGGTC CCAACTTCGG CAAGAACTCG AGTAACTTGT
ATATTTTGGC CAGTGGAACT GTTGGTGCAG CCATGGAGGC TGTGACCCAC GGAGTTAAGG
CTATTGCCTT GAGCTATGCC TTCAACAACC TCGACCACGA CTTCCATATC TTGAAAGAAG
CAGCTAAGAT CTCGGTCAAG TTGATCAAGA AGTTATACGT TCAATTGCAG ACCATGGAAA
ATGTGGATAT CTTTTCTGTT AACGTTCCAT TGATCGAATC GCTAAAGTTG GGATCAACTA
AAATCCACTA TGCTCCCATC TTGAACAACT ACTGGAACTC CATCTACGCT CCACTGGACG
AGCTAAACGA ACATGGACAA CAACAGTATA TGTGGAATCC AGACTTCAAG AAAGTGTACA
AGGACGGTTT GGCTGATCTT ACTCATACTG ATAGCAGAGT TCTTTTGGAG GAAGGAATTA
GCGTCACACC ACTTAAGGCT TCCTTCAACA TCGTGGAGCC ATTTTCTGGT GAAATTACGT
TGGACGATGA TGAAAGCGTA GGAAACTTAG GCAGAAAACT CGTTGCAACT GAAATCGACC
TGAAGGCTAG TAAAGGAAAC AATATAGTAA GTGGAGCTGA ACAGGCGAGG CATCGCTTCT
TGATTACTAT CCCCCAAGAA GCGTATGTAT ACAAGCCATT GGTGGACGCT TTTGAGCAGT
TGCCTGATTT CAGTATTACG ACCGATATCT CACTTTTGAA GAATATTCCT CAAGACGTGA
AGGTATTCCA CTACGGTGAA TACGAAGATA TTGACATTGA CCTCATAGGC GAAAAACCGC
TGCAGTACTA CATACCCTCA TACATCTATA GAAAGGCATT GATACGTAAG CATTTCCTTG
CCAATACCAT CCAGCACTAT GTGGCCAAAC ATCCGGAGTC CGTTCTCATT CAGAATGTCC
CACAAAGCTA CCAGTTGGAA GTAGATTATG CCGAGTTTCT CGATGATGCC TTGGACGACG
CATATGAGTT GCGAGACGAA ATTGAAGCCG GTGGAAGGAC CTGGATTTTG AAGCCCAGCA
TGAGTGACAA GGGCCAGGGC ATAAGATTGT TTAAAACCAT AGACCGGTTG CAAGAAATTT
TTAACTCATT TGAAGAAGGC GATAGCGAAG ATGAAGACGA AGTTAATGAA ACTGAAAACG
GGGTCATCAT CTCACAATTG CGTCATTTCA TCGTCCAGGA ATACAAGTCC CGCCCCTTAC
TTTTGCAAAA TTATGACAAC AAGAAGTTCC ATTTGAGAAC CTACGTCGTT TGCAAAGGTA
ATCTACAAGT GTTTGTGTAC AAGAACATAT TAACTCTTTT CGCCGCAACA GAATACCACG
ACCCCAACGA TGACAATGAC GAAGAACAGG TATCTATGGA TGGACATCTC ACCAATACGT
GTTTACAAGA GACTGGCAAT CCCTTAGTGG TTCCATTCTG GAAGCTAGAG GACACGAAGT
TCAGTGAAGA GCAGAAGAAG AAAGTCTTTG ACCAAGTCCT TGAAACCACA AAAGAATTGT
ATACGGCTGC CACGAGTGTT GACAAAATGA ACTTCCAGCC TATGGATAAT GCCATAGAAA
TATTTGGCAT AGACTTCTTG GTCAACGAAG ACTACACTGT GACCCTTCTT GAGGTCAACT
CATACCCTGA TTTCAAGCAG ACCGGAGATG ACTTGAAGGG CCTTATTTAC GAATTGTTTG
ACAGAGTAGT AAAGGAAGTC GTGAGCCCTC TAGTTACTGG AACACAGTCA GAAACCACGG
AAAGTACATT GGTTTCAGTT TTGTCCCAAT AGTTTATAAT AGTTATCAAT GGAATAAAGC
ATGC
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| Protein sequence | MHVLLTNDDG PLDDNSCPYM KYFVDEILTT TDWDLSIVVP NEQRSWIGKA HFAGKTLTTT
YIYTRLLTSA PNANINSFEG PFKTSQPQFP QPEWQEWVLV NSTPAACADI GIHHVYSKKK
GPIDLVLSGP NFGKNSSNLY ILASGTVGAA MEAVTHGVKA IALSYAFNNL DHDFHILKEA
AKISVKLIKK LYVQLQTMEN VDIFSVNVPL IESLKLGSTK IHYAPILNNY WNSIYAPLDE
LNEHGQQQYM WNPDFKKVYK DGLADLTHTD SRVLLEEGIS VTPLKASFNI VEPFSGEITL
DDDESAENSH RFLITIPQEA YVYKPLLPDF SITTDISLLK NIPQDVKVFH YGEYEDIDID
LIGEKPLQYY IPSYIYRKAL IRKHFLANTI QHYVAKHPES VLIQNVPQSY QLEVDYAEFL
DDALDDAYEL RDEIEAGGRT WILKPSMSDK GQGIRLFKTI DRLQEIFNSF EEGDSEDEDE
VNETENGVII SQLRHFIVQE YKSRPLLLQN YDNKKFHLRT YVVCKGNLQV FVYKNILTLF
AATEYHDPND DNDEEQVSMD GHLTNTCLQE TGNPLVVPFW KLEDTKFSEE QKKKVFDQVL
ETTKELYTAA TSVDKMNFQP MDNAIEIFGI DFLVNEDYTV TLLEVNSYPD FKQTGDDLKG
LIYELFDRVV KEVVSPLVTG TQSETTESTL VSVLSQ
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