Gene PICST_74808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_74808 
Symbol 
ID4851530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp2072213 
End bp2072857 
Gene Length645 bp 
Protein Length182 aa 
Translation table 
GC content42% 
IMG OID640393238 
Productpredicted protein 
Protein accessionXP_001387633 
Protein GI126274763 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.254986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0942071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCAAT TTATCGAACA TAGCCATTTG TACAACCATG ACTTTTCCAC GGCTTCTTTG 
GCCTATTTGA ACCGATATCC TAATCCGTAT GCCAAACATG TTAAGAGCAG TGACACTTTG
GAACATTGTA TTGATGAAGA TGGCAGATTA AGGACCACAA GATTGGTGGT CAAGACGGGA
AGGTTGCCTC AGTTCATTAA GCCATTTTTG GGTACCAGTT TGGACTCGTG GATTATTGAA
AAGAGTGTGA TTGATCCCAA GGGTAAGATT CTTCTTTCGT ACACTGCGAA TGTAGATCAT
CGCAAGCTAC TTAAAGTCGA GGAGTATTTG AAGTACTCGT GTGAAGATGG AATCAACACA
TTGGTTGAGA GCAAGGTCAA GTTCTCGTCC AATTTTGTAG GCTTGAAGCA GAAGATTGAG
CAATGGAGTC ACAACAGGTT TTTGTCTAAC ATCTCTAACT CTCGCGAGGG CTTGAAGTTT
GTCATGAACA GGTTGAAGGA AAGAGGTGGG CTCTGGTACA GAGAGAGGGA TACATCTAGT
TTATTGTAGT TGTCTGAGCA TTGAGCTTAG TATGATATGA TCCGAGGCTA TTGGCCCATT
ATGACGTTAT GGAAACATGT ATATAAGAAT GCACGGTATA GTGTG
 
Protein sequence
MVQFIEHSHL YNHDFSTASL AYLNRYPNPY AKHVKSSDTL EHCIDEDGRL RTTRLVVKTG 
RLPQFIKPFL GTSLDSWIIE KSVIDPKGKI LLSYTANVDH RKLLKVEEYL KYSCEDGINT
LVESKVKFSS NFVGLKQKIE QWSHNRFLSN ISNSREGLKF VMNRLKERGG LWYRERDTSS
LL