| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_74652 |
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| Symbol | RPC40 |
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| ID | 4851444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1831656 |
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| End bp | 1832829 |
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| Gene Length | 1174 bp |
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| Protein Length | 336 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 640393152 |
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| Product | RNA polymerase III (C) subunit |
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| Protein accession | XP_001387588 |
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| Protein GI | 126274572 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.621842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AAACACCAGC ATTCTGCCAT GTCAGACAAC AACATCGTCG GGGTGGAGTA CAACCGTGTA
ACCAACACAT CGTCGACCGA TTTCCCCGGC CATCAGGCCA ACGGCGACTA TGCATGGGAC
ATTGAAAAGT TCAAGGACAA GTTTGAAATC AATATCTCTT ACAAGACAGA CAGAACCGCC
AACTTCGACT TGATTAACAT TGACACTGCC ATAGCCAATG CGTTCCGTAG AATCATGATT
TCCGAAGTTC CTTCGGTTGC TGCCGAGGCT GTGTACATGT TCATGAATAC CTCTGTTATC
CAGGATGAGG TTTTGGCTCA CAGAATTGGG TTGATTCCTC TCAGAGTCGA TCCTGATAAA
ATGAACTGGG TAGACAAGAC ACAGCTGCCT GAAGATCGTT ATACCGAGGA CAACACCATT
GTGTTGACTT TGGATGTAGT TTGTACAAAA AATCCTCATG CTCCCAAGAA CTCCACCAAC
CCCAAGGAGC TCTACAGAAA TGCCCATGTG TACGCCAGAG ACTTGAAATT CGAGCCTCAT
GGTAAACAAG CAGAGCTTTT CAAGGATTTG CCAGTTGTTG CTGCCGATCC AGACATCTTG
ATTGCCAAGT TGAGACCTGG CCAGGAGATC TCCTTGAGAG CACACTGTAT CTTGGGAGTT
GGCTGTGACC ACGCCAAGTT TTCTCCTGTG TCTACAGCTT CGTATAGATT GATGCCTGTA
ATTGACATTG TTGAGCCAAT CAGAGGCGAC TCAGCTGTCA GATTCCAGAA ATGCTTCCCA
TCCGGTGTCA TAGGCATCAA TGCTGACGGT GAAGCCTACG TGAAGGACGC CAGAAAGGAC
ACTGTTTCGA GAGAAGTGTT GAGACATGAA GAATTCGATG GAAAGGTCAA GTTGGGCAGA
AAGAGAGACC ATTTCATCTT CAACGTAGAG TCGACTGGTG CCATGGCTCC AGAAGAGATC
TTCTTCAAAT CGTTGTTGGT GTTGAAGAAC AAGGTTGAAT ACTTGAGAAA CTGTCCTATT
GGCCAGTAAA TTTCATGAAC TCTGATACTC ACCAGTAGGT TTATATAAGC GGACGTCAGA
TATCAACAGA TATCCTCAGA TACTGCTCCA TAGGCTGCGA TGGCTGTCTC CATCATGGCC
CTGTACACTA ATTAGATAAA TAAAATTGCA TTAT
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| Protein sequence | MSDNNIVGVE YNRVTNTSST DFPGHQANGD YAWDIEKFKD KFEINISYKT DRTANFDLIN
IDTAIANAFR RIMISEVPSV AAEAVYMFMN TSVIQDEVLA HRIGLIPLRV DPDKMNWVDK
TQLPEDRYTE DNTIVLTLDV VCTKNPHAPK NSTNPKELYR NAHVYARDLK FEPHGKQAEL
FKDLPVVAAD PDILIAKLRP GQEISLRAHC ILGVGCDHAK FSPVSTASYR LMPVIDIVEP
IRGDSAVRFQ KCFPSGVIGI NADGEAYVKD ARKDTVSREV LRHEEFDGKV KLGRKRDHFI
FNVESTGAMA PEEIFFKSLL VLKNKVEYLR NCPIGQ
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