| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_74636 |
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| Symbol | TIF1 |
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| ID | 4851033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 775146 |
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| End bp | 776629 |
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| Gene Length | 1484 bp |
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| Protein Length | 397 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640392741 |
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| Product | Eukaryotic initiation factor 4A (eIF4A) (eIF-4A) |
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| Protein accession | XP_001387376 |
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| Protein GI | 126274019 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.471027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.975431 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TCCTTTTTTG TGAATCCCAG CAAAGTTCTT GTTATTTTAC ACATAAACTC AGCAATCATG
TCCTCCGACG GTATTAAGGA AATTGACTCC GATTTGATCG AAACCAACTA CGACAATGTC
GTGTACAAGT TCGATGACTT GAACTTGAAG CCTAACATCG TGAGAGGTAT CTTTGGTTAC
GGTTACGAAA CCCCATCGGC CATTCAACAA AGAGCTATCT TGCCAATCAC TGAAGGTCGT
GATGTCCTTG CCCAGGCCCA ATCCGGTACC GGTAAGACTG CCACTTTCAC CATCTCTGCC
TTGCAAAGAA TTGATGAAAA CGAAAAGAGC ACCCAAGCCT TGATCTTGGC TCCAACCAGA
GAATTGGCTC TTCAAATCAA GAACGTCATT ACTTCCATTG GTTTGTACTT GAACGTGACT
GTCCATGCCT CCATTGGTGG TACCTCTATG CAAGACGATA TCGAAGCCTT CAGATCAGGT
GTCCAAGTCG TTGTTGGTAC TCCAGGTAGA GTTTTCGACA TGATTGAAAG AAGATACTTC
AAGACCGAAA AGGTCAAGAT GTTCATTATG GATGAAGCCG ATGAAATGTT ATCGTCTGGT
TTCAAGGAAC AAATCTACAA CATTTTCCGT TTGTTGCCAG AAACTACCCA AGTCGTCTTG
TTGTCTGCCA CTATGCCTCA AGATGTGTTG GAAGTCACCA CCAAGTTCAT GAACAACCCT
GTCAGAATCT TGGTCAAGAA GGACGAATTG ACCTTGGAAG GTATCAAGCA GTTCTACATC
AACGTCGAAT TGGAAGACTA CAAGTTCGAC TGTTTGTGTG ACTTGTACGA CTCCATCTCC
GTCACCCAGG CCGTTATCTT CTGTAACACC AGATCTAAGG TCGAATTCTT GACCACCAAG
TTGAAGGCTG AAAACTTCAC TGTCTCTGCC ATCCACGCCG ACTTGCCCCA AGCCGAAAGA
GACACAATCA TGAAGGAATT CAGATCTGGT TCCTCCCGTA TCTTGATTGC TACCGACTTG
TTGGCTAGAG GTATCGATGT CCAACAGGTC TCTTTGGTCA TCAACTACGA CTTGCCATCT
AACAAGGAAA ACTACATCCA CAGAATCGGT AGAGGTGGTC GTTTCGGTAG AAAGGGTGTA
GCCATCAACT TTGTCACCGA AAGAGACGTT GGTATGATGA GAGAAATCGA ACAATTCTAC
TCCACTCAAA TCGAAGAAAT GCCTGCTGAT ATCGGTGCTT TGTTTAACTA AGCTGCTTAG
TTCATTATGT AATTTTAATT CCATAGTTTC TCTTTGTCAT TTATATTTGG TCGAATACAA
AATTCTGAAA ATTTACTATC TCTGGGTATT TGACCTAAAA GAATAATATT TCGCATTGTG
TGGTAGTTGA ATCATAGAGC TGTAATTGGA ACCGAATAGA AAGGAAACTT CTGTTTGACA
ATATAATTCT ATCTACTTCT TACTTTCACG GCAGTAATCC CTAG
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| Protein sequence | MSSDGIKEID SDLIETNYDN VVYKFDDLNL KPNIVRGIFG YGYETPSAIQ QRAILPITEG
RDVLAQAQSG TGKTATFTIS ALQRIDENEK STQALILAPT RELALQIKNV ITSIGLYLNV
TVHASIGGTS MQDDIEAFRS GVQVVVGTPG RVFDMIERRY FKTEKVKMFI MDEADEMLSS
GFKEQIYNIF RLLPETTQVV LLSATMPQDV LEVTTKFMNN PVRILVKKDE LTLEGIKQFY
INVELEDYKF DCLCDLYDSI SVTQAVIFCN TRSKVEFLTT KLKAENFTVS AIHADLPQAE
RDTIMKEFRS GSSRILIATD LLARGIDVQQ VSLVINYDLP SNKENYIHRI GRGGRFGRKG
VAINFVTERD VGMMREIEQF YSTQIEEMPA DIGALFN
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