| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_74592 |
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| Symbol | USP1 |
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| ID | 4850846 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 213593 |
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| End bp | 216445 |
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| Gene Length | 2853 bp |
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| Protein Length | 480 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640392554 |
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| Product | universal stress protein (USP) family protein possible involvement in nucleo-mitochondrial control of maltose, galactose and raffinose utilization |
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| Protein accession | XP_001387280 |
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| Protein GI | 126273687 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CAGATCTGAC GAATTATTGT GAAACTTGAG CTCAAAACAC AAGTTCATTT CATTCCGAGA
AAGGCTCTAA AGAGAATAGG CCCAAATTCG TGATCCAAAG AGATACTATC TACAGAATAG
CGAGATACAA CAGAGAGATT AGATATATCA GTGGTAAAAC ATAGGAACAT ACCAGTAATA
TTTGCTATAG AAAAGTGTCA TATAAGGATA GGAAATTTAT TGCAAAGCCA TAATCATCTT
TCCCAGAGAA ATTATACTGA AGAGTTCCAT TATCGGGTGC CATTACTGAA GCTAGTCAAT
TCGCTAGAGA TAGATTATTA GCATATTAGT GGTAATCGGC TTAAGTAACA CGCCTAGTTC
TAGAATTACG TCGCGGTTCC ACAGTTACCA CGATTTTATT TACGAACCCA AGCCCCTTCT
ACGAGGCATT CCAGGCGTTC CTGCATTCTG CTCCCCACGA ACAGTGACAG TACCAATTCC
GCAAGAACCA AAGTACTAAA TAGAGATGAT GTCACGGCAA TCTCGTTTGG AAGCCGAGAA
GCTTCAAATC ATCCAGAAGT CGATGTCGAA CCGAGGAAGA TCGCTTTCAC CCACGGCTCA
CGGAGCCGGC GGCAATACTA TCAACAATGT CAATTCGCGT TCTTCGTCTA CACTGAACGA
GGAGTTTTCG AAGGACTTGA AATGGTCCAT TACGAACCAC GATCCGCTGG AACGGATTAC
CGTTACACAT GATGATGGAA CTGTAGAGCA GCCAAATAAC GACTTGTGGG CCAACGAGGT
TTCGGACGAA GAACATATCT CCGACGACGA CACTAACGAG AAGTTCCAGT ACGATGACAC
TGGAAATATT CTCCCTAATT ATGCTTGTCA CGACGATAAG ATAAACGAGA TTTCGTCGAT
TTTGGAGAAC TCCAATTTGG ACGATCAGTC GACGATCAAG AAGCTCGAAG AGTTGACAGC
TAATGAAAGA GCCTTTGCCA ATGCCAAGAA CATAGGAAGT CTTATCGATA AGGAAGCACT
CAATAAGCTA GCCAATGAAA AACAGAAATT GACTGGCAAC GAAATGTTGG ACTTGAACCG
GTCAGATCAG GATGCTTTGG AAAGAAAACA GAAGCTTGAG AATTACCAGG CTTACAGAAA
GAAGATTATC GACCACGAGA ATGGTAAGGA TGGCACTGCG AAGGACAGTG CTACTACTTC
CACACTTCTG CCGGTAAAGC TGCCAGAGGG TGAAGCGGTA GCTGAAAATG ACGAAGACTT
TATGATTCCC TATACTTCAG CTGTAGAAGA CAAATTGGAT AGTGAGTTTG CCTCCCAATT
GAACGAAACC ATCAAGGAAG GCGAGATTGA CTCCAACAAG AGCCAGTCCA GAGTGATCCA
GACCATCACG AGAGGAAACT TCTTCCAATT AGTCAATCCC AAGGTCAAGC CGAAGATGTT
TTTGGTGTGT ATGGACTTCT CGCCAGAGTC GATTTTCGCA TTGGAGTGGT GTCTTGGTAC
AGTTTTGGTA GATGGCTCAG TGTTGTTTAT AGTGTACGTC ATTGAAGAGA ACGATAACAA
CCACAACTTG AAGGGCAATA CTAGCAACGA AAATACCCGT GAACAGTACC GGTTGAATAT
GTTAAACAAG GCCAAACAAC AGGTGTTGAA CTTGTTGAAG TTGACCAAAT TGCAAATCCA
TATCGTCATC GAAATCATCC ACCACCCTAT TCCCAGACAC TTGATCTTGG AGTTCATCGA
CAATTTACAG CCTACATTGG TGGTAGTGGG CTCCAAGGGC CAGAGTGCCA TCAAGGGTGT
TCTTTTGGGG TCGCTTTCCA ACTACTTGGT CACCAAGTCG TCTGTTCCGG TGATGGTGGT
GCGTGAGAAG TTGAAGAAGA TCAACAGATT CAAGTCTGGT TCTTCCGTCT TTACCAACAA
CATTAAGCCG TTGACATTGT CGGAAGCCAG AATTGACTGA ACTATGTTAT GTCAGAAATT
TCAGTTCTTC TACTACATTT ACATTACTTT AGGTTACGTT ACTTCATTCC TTAGTTAGAC
AGTTCTATCG AAGTATTATT TGTGTTACAT AAGACCTTTC CTGTAAGTAA ACCCTGTATT
CCCATTATCA TAAACCGCGT AGAGATGTAC TAAAGAAATC ATCAAATACA ACTTCTTCAA
TGCTCAATAG TACAACATCT TCTTTACTGC TTGTCCGCTG CTTCAACTAT TCTCAAAAGT
ACAACTCTGT AAATCCTTTG GCTGTGAACT TTCTTCCACA GTCCCCAGCT CCACACTTAG
TAGGAGAAGA AAGTTGAGGA TTATCAATTG TGAAACCAGA AGGAGTCGCT TTTGTTCTTC
GGGCTCTGTT TCCGATATTC TTCACACATC GTCCACAAAA CGTATGCCCA CACTTGGCGA
TAAAGATTCG TTTCGAGAGT TCCTTATCAA CCTTGGAACA CTGCTTCACA CAAAACCACG
GTGCTTGCAC CCGGTATTGT TTGGCTAACT TCTCGAAATG AAGATCGTAC CGGTGATCTG
ATTTGAAATC TTCAGGAATG CCTTCTCCTA AGATAATACC ACATAAACTA CAGCAGAGGT
TTGACTCAGG CTTGATATCG TTTACATACC CAGCGAGTTC TTCCTTGGAG ACTTTCTTCT
TCTCCTGCAA TGTCTTACGA TTGTAGATAT TTTCGTTAGC GAGTCTGGCA TCAAGTGCGT
TTTCGTTATC TCTCTCTATT CGCTGCATTA TAGACTGTTC AGCCTCCTCC AAATCAAATC
TACTTCCAGG GAAGTCATAC TGAGTAATTC CTCTAAGCGA AAACGGCACA GTACGCAAAA
TATCCATAAA CCCCACCTGC CCATCGGTTC GGC
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| Protein sequence | MMSRQSRLEA EKLQIIQKSM SNRGRSLSPT AHGAGGNTIN NVNSRSSSTL NEEFSKDLKW
SITNHDPLER ITVTHDDGTV EQPNNDLWAN EVSDEEHISD DDTNEKFQYD DTGNILPNYA
CHDDKINEIS SILENSNLDD QSTIKKLEEL TANERAFANA KNIGSLIDKE ALNKLANEKQ
KLTGNEMLDL NRSDQDALER KQKLENYQAY RKKIIDHENG KDGTAKDSAT TSTLLPVKLP
EAENDEDFMI PYTSAVEDKL DSEFASQLNE TIKEGEIDSN KSQSRVIQTI TRGNFFQLVN
PKVKPKMFLV CMDFSPESIF ALEWCLGTVL VDGSVLFIVY VIEENDNNHN LKGNTSNENT
REQYRLNMLN KAKQQVLNLL KLTKLQIHIV IEIIHHPIPR HLILEFIDNL QPTLVVVGSK
GQSAIKGVLL GSLSNYLVTK SSVPVMVVRE KLKKINRFKS GSSVFTNNIK PLTLSEARID
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