| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_74533 |
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| Symbol | CCT6 |
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| ID | 4850838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 194244 |
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| End bp | 196060 |
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| Gene Length | 1817 bp |
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| Protein Length | 558 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640392546 |
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| Product | cytoplasmic chaperonin of the Cct ring complex |
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| Protein accession | XP_001387276 |
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| Protein GI | 126273647 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02347] T-complex protein 1, zeta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.265552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CAGCATAATT GCCTTGGAAC TTCTCTCTTA GACAAATTAG AAACCGAGAC TCATTCACAT
AAAGCCATGT CGACTTCGAT CCAATTGTTG AATCCCAAGG CTGAGTCTAT CAAACGTTCC
CATGCGCTTA AGGTGAACAC GTCTGCTGCC CAAGGCTTGA TGCAGGTGTT AGCCTCTAAC
TTAGGACCCA AAGGAACGTT GAAGTTGTTG GTAGATGGCT CTGGTGGTCT CAAATTGACC
AAAGACGGAA AGGTCTTGTT AACTGAGATG CAGATCCAAC ATCCTACAGC ACTTGTTATT
GCCCGTGCTG CCACAGCCCA AGATGAGATT GCTGGAGATG GTACTACCAC TGTAGTTTTA
CTTGTAGGAG AGTTATTGAA GCAAGCTGAA CGTTTCACAA GTGAAGGCGT GCATCCTCGG
GTGATTGTCG ATGGGTTTGA GATTGCCAGA GAGCAGACGT TGAAGTATTT GGAGACTTTC
AAACAGAGTC CAGACACGTT TGACCGTGAG TTCTTACTTC AGATCGCCAG ATCCTCTTTG
AGCACCAAAG TTACTAACGA GTTGGCTGAT GTATTGACGC CTATTGTGAC TGATGCTGTA
TTGAGTGTAA AGACTGAGGA AGAAAGAGGC ATAGATTTAC TCATGATTGA AGTGATGACG
ATGCAACATG GCAATTCTAA GGATACAGAG CTTGTAAGAG GTTTGGTGTT GGACCATGGT
GCCAGACATC CCGACATGCC TAAACGTGTA GAGAACGCTC ACATGTTGAT TTTGAACGTG
TCGTTGGAAT ATGAGAAGAC TGAAGTGAAT TCTGGATTTT TCTACTCAAC AGCTGAACAG
AGAGAGAAGT TGGTTGCTTC GGAAAGAAAG TTTGTAGATG AGAAGTTGAA GAAGATCATA
GAGTTGAAGA ACGAGGTGTG TGAACTTGGA TCCAACAAGG GCTTTGTAAT CATCAACCAG
AAGGGTATTG ACCCCATGTC TTTGGATGTT TTAGCTAAGA ACGGTATCTT GGCTTTGAGA
AGAGCCAAGA GAAGAAACAT GGAAAGATTG CAGTTGATCT GTGGAGGGGA AGCCCAGAAC
TCAGTCGACG ACTTGTCGCC AGAGATCTTG GGATACTCTG GCTTGGTATA TGAGAACAGC
ATTGGTGAAG ACAAGTTCAC CTACGTCACA GAAAATAAAG AACCCAAGGC TGCCACCATT
TTAATCAAGG GAGCCAACTC TCACATATTG CAACAGACTA AAGATGCTAT AAGGGATGGG
TTAAGGGCTG TTTCCAACGT GTTAAAGGAC CAGGCCATCT TACCGGGTGC TGGTGCCTTC
TGGTTGAGTG CCAACGACTA CTTATTACAC AGCGAAGACA GCAAGAAGTT TGCTAGAGGA
AGAAGTAAAC CAGGTGTGCA AGCCTATGGT GAAGCTCTCT TGACAATTCC AAAGACATTG
GCTGCCAACG CTGGTTTAGA CTCGTTGGAA ACCATTTCCA ACTGCCAAGA TGAAATCAAC
GAGGGTCACG TAGTTGGTGT TGATTTGAAG TCCGGTGAGC CTATCGATCC TACGGTGGAA
GGAATTTGGG ATACATACAG AGTGATCAGA AACGCCATTT CGACAGCCAC GGGTATAGCA
TCCAATTTGT TGTTGTGTGA CGAGTTGTTG AAGGCTGGCC GTTCGTCGTT GAAGGAAGGT
GGTGCTGGAG GTCCAGGCGG TGCACCTATG GGAGCACCTA TGGGCGCCCC TCCTATGATG
TAAATAGGAT GATAGAATAT ACCAACAGAA GATGTAGCAG TATGCATTGT AGGTGACACA
ATAGACTATA ATCAAAT
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| Protein sequence | MSTSIQLLNP KAESIKRSHA LKVNTSAAQG LMQVLASNLG PKGTLKLLVD GSGGLKLTKD
GKVLLTEMQI QHPTALVIAR AATAQDEIAG DGTTTVVLLV GELLKQAERF TSEGVHPRVI
VDGFEIAREQ TLKYLETFKQ SPDTFDREFL LQIARSSLST KVTNELADVL TPIVTDAVLS
VKTEEERGID LLMIEVMTMQ HGNSKDTELV RGLVLDHGAR HPDMPKRVEN AHMLILNVSL
EYEKTEVNSG FFYSTAEQRE KLVASERKFV DEKLKKIIEL KNEVCELGSN KGFVIINQKG
IDPMSLDVLA KNGILALRRA KRRNMERLQL ICGGEAQNSV DDLSPEILGY SGLVYENSIG
EDKFTYVTEN KEPKAATILI KGANSHILQQ TKDAIRDGLR AVSNVLKDQA ILPGAGAFWL
SANDYLLHSE DSKKFARGRS KPGVQAYGEA LLTIPKTLAA NAGLDSLETI SNCQDEINEG
HVVGVDLKSG EPIDPTVEGI WDTYRVIRNA ISTATGIASN LLLCDELLKA GRSSLKEGGA
GGPGGAPMGA PMGAPPMM
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