Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_69023 |
Symbol | |
ID | 4851418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 1768182 |
End bp | 1768977 |
Gene Length | 796 bp |
Protein Length | 237 aa |
Translation table | |
GC content | 44% |
IMG OID | 640393126 |
Product | predicted protein |
Protein accession | XP_001387570 |
Protein GI | 126274546 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.348207 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TGAAATCACA AACATACACT CACAATGGCT TCTAATCCAC CAGGCGAATG CTGTAGAACT CGTAACTTCC ACGAAGGTAC TCCCATCGGA ACTCACAAAA CCATTCTCGG GCTCAACACC TACCAAGTTG GTGCTGAATA CGGCAACGAC AGAATCATCG TGATTCTCGT CGATGTCCAT GGAAACAAGT TCAACAACAC TTTGTTGCTT GCTGACGAAT TGTCCAAGGC TAAGTACCAA GTCTTAATTC CGGACATCTT GAGCAACGAT CCAGTCGATG GCCAGGATTT CGCTACTTGG TTGCCTAAAC ATGGTCCGGA AATTACTGCT CCTATTGTTG ACGCTTTCTT GAAGGCTGTC AATGACGAAT TGAAGCCAAA GTTCCTTGCT GGTATTGGCT ACTGCTTCGG TGCTAAGTAT GTCATTCAGA ATCTTTCTTC TAAGGGTCAC TTGTCTGCTG GTGCCGTTGC TCATCCTTCG TTTGTCACTA TTGAAGAAGT CTCAGCTATC AAGAAACCAA TTCTTATTTC GGCTGCTGAA ACTGACTCCA TCTTTACTGT CGAGTTGAGA CACCAGTCTG AAGCCGAGTT GATCAAGATC GGTGCTCGCT ACCAACTCGA CTTGTTCTCT GGTGTTGAGC ACGGCTACTC CGTTAGAGGT GATATCTCGA ACCCTGTTGT CAAGTACGCA AAGGAAAAGA CTCTTGACGA CCAGGTCAGA TGGTTCAACC AATTCTAGAT GACTGATTCT ATATAGTTAA ATTGTTAGAG AGATTTGAAT ATATATTTAC TGTTAG
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Protein sequence | MASNPPGECC RTRNFHEGTP IGTHKTILGL NTYQVGAEYG NDRIIVILVD VHGNKFNNTL LLADELSKAK YQVLIPDILS NDPVDGQDFA TWLPKHGPEI TAPIVDAFLK AVNDELKPKF LAGIGYCFGA KYVIQNLSSK GHLSAGAVAH PSFVTIEEVS AIKKPILISA AETDSIFTVE LRHQSEAELI KIGARYQLDL FSGVEHGYSV RGDISNPVVK YAKEKTLDDQ VRWFNQF
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