| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_68812 |
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| Symbol | SIK1 |
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| ID | 4851526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2064760 |
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| End bp | 2066440 |
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| Gene Length | 1681 bp |
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| Protein Length | 499 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640393234 |
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| Product | nucleolar protein involved in pre- rRNA processing |
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| Protein accession | XP_001387632 |
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| Protein GI | 126274754 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1498] Protein implicated in ribosomal biogenesis, Nop56p homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.116382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0643077 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CGCAGAACTC GAAATCATTA AAGACAACAT GGCTGGTTTG GACTATCTTC TCTTTGAAGA
AGCTACCGGT TACGGGATCT TCAAGGTCTT GATCCAGCAG GATGACATCG CTTCTAGACA
GAAGGAAGTA CAGGAAGCTT CCAACGACTT GGGCAAGTTC TCCAAGATGA TTGAATTGGT
CTCTTTTGCA CCATTCAAGG GTGCTGCTCA AGCTTTGGAA AACGCCAACG ACATCTCTGA
AGGTTTAGTA TCCGACTACT TAAAGTCAAT CTTGGAATTG AACTTACCAA AGGGTTCTTC
TAAGAACAAG ATTGCCTTGG GTGTATCTGA CAAGAACTTG GGTCCTTCTA TCAAGGAAAT
ATTCCCTTAC GTTGATTGTT TGTCCAACGA AATCGTCCAG GACTTCTTGA GAGGTATCAG
AGTCCACGGC GACAAGTTGT TCAAGGATTT GCACGAAGGT GATATTGAAA GAGCACAGTT
AGGTTTGGGT CATGCCTTCT CTAGAGCTAA GGTTAAGTTC TCAGTACAAA AGAATGACAA
CCACATCATT CAGGCTATTG CTTTGTTGGA CCAGTTGGAC AAGGATATCA ACACCTTCTC
CATGAGAGTC AAGGAATGGT ACGGATGGCA CTTTCCAGAG TTGGCCAAAA TTGTCCCAGA
CAATTACACT TTTGCCAAGT TGGCTCTTTT CATCAAAGAC AAGGCTTCTT TGACTGAAGA
CTCGTTGCAT GACATCGCTG CTTTGGTTAA CGAAGACTCT GGTGTTGCCC AGAGAATCAT
AGATAATGCC AGAATCTCTA TGGGACAAGA CATCTCGGAA CAGGACATGC AGAACGTTTC
AACTTTCGCT GAAAGAGTGG TAAACATCAG TGACTACCGT ACCAAGTTGT TCCAGTATTT
AACAGATAAG ATGCACACTG TTGCTCCTAA CTTGTCGACG TTGATTGGAG AAGTTGTTGG
TGCCAGATTG ATCTCTCACG CTGGTTCTTT GACCAACTTG TCTAAGCAAG CCGCCTCTAC
TGTTCAAATC TTGGGTGCTG AAAAGGCCTT GTTCAGAGCT TTGAAGACTA AGGGTAACAC
TCCTAAATAC GGGTTAATCT ATCACTCGTC TTTCATTGGT AAGGCTTCTG CCAAGAACAA
GGGTAGAATT TCCAGATACT TAGCTAACAA GTGTTCCATT GCTTCCAGAA TCGACAACTA
CTCGGATGAG CCATCTACTG CCTTTGGTGA AATATTAAAG AAGCAGGTGG AAGAAAGATT
GAACTTCTAC GACACCGGTG CCCCACCTAT GAAGAATTCC GATGCCATTA AAGCTGCTTT
GGCTTTAGGT GCTAGCGACT TGGCTGGAGT ACCAGCCTCC AACGAAGATG ACGAGCCTGA
AACTCCTAAG AAGGAAAAGA AGGAGAAGAA GGAAAAGAAG GAAAAGAAGG AAAAGAAGGA
AAAGAAGGAA AAGAAGGAAA AGAAGGAAAA GAAGCGTAAG GCTGAAGATG ATGAATCTCC
AAAGAAGAAG AAGAAGTCCA AGAACTAGAT TATCACCTCT TTTTAAACAC TCGGCATTTC
TCGACGACCT TCAATTCGTC AACCCCAGTT GCTTTTTTAT CCATTGTCTG GTCACGGCCT
GATCGACAAT ATTATTGTAA ACTATAGTAC TTTCTATTGC ATGTTAATAT ACTAGATACC
G
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| Protein sequence | MAGLDYLLFE EATGYGIFKV LIQQDDIASR QKEVQEASND LGKFSKMIEL VSFAPFKGAA
QALENANDIS EGLVSDYLKS ILELNLPKGS SKNKIALGVS DKNLGPSIKE IFPYVDCLSN
EIVQDFLRGI RVHGDKLFKD LHEGDIERAQ LGLGHAFSRA KVKFSVQKND NHIIQAIALL
DQLDKDINTF SMRVKEWYGW HFPELAKIVP DNYTFAKLAL FIKDKASLTE DSLHDIAALV
NEDSGVAQRI IDNARISMGQ DISEQDMQNV STFAERVVNI SDYRTKLFQY LTDKMHTVAP
NLSTLIGEVV GARLISHAGS LTNLSKQAAS TVQILGAEKA LFRALKTKGN TPKYGLIYHS
SFIGKASAKN KGRISRYLAN KCSIASRIDN YSDEPSTAFG EILKKQVEER LNFYDTGAPP
MKNSDAIKAA LALGASDLAG VPASNEDDEP ETPKKEKKEK KEKKEKKEKK EKKEKKEKKE
KKRKAEDDES PKKKKKSKN
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