| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_68770 |
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| Symbol | LEU4 |
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| ID | 4850963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 569514 |
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| End bp | 571337 |
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| Gene Length | 1824 bp |
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| Protein Length | 571 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | 640392671 |
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| Product | 2-isopropylmalate synthase (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) |
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| Protein accession | XP_001387341 |
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| Protein GI | 126273924 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AGACTCTTTC AAAGAGCTTC CAAATCTATA CCCCCAGTGG TGCCAGCATA CAAAAATATG
TTAAAGGATC CTTCCACCAA ATATGCTGCC TTTAAAGGAG TCAAGTTGGA CAAGAGAACC
TGGCCCTCAA AGTCTATCAC CAAGGCTCCT AGGTGGTTAT CTACTGATTT AAGAGATGGT
AACCAAGCGT TGCCTGATCC CATGTCTGTC GAAGAGAAGA AGGAGTATTT TCACAAGCTC
TTGGAGATCG GATTCAAAGA AATCGAGGTA TCTTTCCCTT CTGCATCTCA AACAGATTTT
GACTTCACCA GATATGCTGT GGAGAACGCA CCAGATGATG TTTCGATCCA AGTTTTGACT
CAGTCTAGAG AACCTTTGAT CAGAAGAACT GTTGAATCCG TAAAGGGTGC TAAGAAGGCT
ACCATACATA CATACTTGGC TACTTCTGAC GTTTTCCGTG ATGTTGTTTT CAACATGTCA
CAAGAAGATG CAATTGCCAA AGCCATTGAA ACTACCAAGT TGGTCAAGTC TTTGACAAAG
GACGATCCAG AAATGCAGGA AACCGAGTGG ACCTTGGAAT TCTCTCCTGA ATGCTTCTCA
GATACTCCTA CCGAATTTGC TGTGCAAATT TGTGAAGCAG TCAAGAACGT CTGGGAGCCA
ACTGTAGAGA ATCCTATCAT TTTCAACTTG CCAGCTACCG TTGAAGTTGC TTCTCCAAAC
GTCTACGCTG ACCAGATCGA ATACTTTGCT ACCCACATTT CCGAACGTGA AAAGGTGTGT
ATTTCTCTTC ATGCTCACAA TGACCGTGGC TGCGGTGTTG CTGCCTCGGA ATTAGGTTTA
TTGGCTGGCG GAGACAGAGT CGAAGGTTGT TTGTTTGGAA ACGGTGAAAG AACCGGTAAC
GTAGACTTGA TCACTGTTGC TCTCAACATG TACACCAATG GAGTTGCACC GGAGTTGGAC
TTTTCAGAAA TCGAAAAGCT CATCGAGGTC AGTGAAAGAT GTAACAAAAT CCCAGTTCAC
CCAAGAGCTC CATACTCTGG ATCCTTGGTC GTTTGTGCCT TCTCTGGTTC TCACCAAGAT
GCTATCAAGA AGGGATTCTC CAAGGCTGAA GCCAGAGCTG CTAGGGGTGA CACCAAATGG
GCCATTCCAT ACTTGCCATT AGACCCTAAG GATATCGGTA GAAACTACGA GGCCGTTATC
AGAGTCAACT CTCAATCTGG TAAGGGAGGT GCTGCCTGGG TCATCTTGAG ATCTCTCGGC
TTGGACTTGC CAAGACACTT GCAAGTTGTC TTTTCTGGTA TTGTTCAGGA AAGAGCTGAC
TCTTTGGGTA GAGAATTGAA GTCTGAAGAG ATTGCCGCTT TGTTCAACGA GCAGTACTGC
TCTACTTCCA ACTTGTCTGT CAAGGACTTC GAGATAACTA AGAGAAAGAA TGCTCCAGAG
AACAAGGACC GTGAGATCTT TGCTGTCTTG CAGGCTGGAT CCAAGACCGT TGACGTCAGT
GGACAAGGTA ACGGACCTAT TTCGGCCTTT GTGGATGCCA TATCCAAGAA ATACGGTGTT
TCCTTTGAAG TCGTCAACTA CAGTGAACAC AGTTTAGGCA GTGGTACCCA GAGTAAGGCT
GCTACTTACA TTGAGTTAGC CTACAACAAC TCTAACAACG AGCATGTTAC AAAGTGGGGA
TGCGGCATTA ACACAGATGT GTCGCAGGCT TCGATGGAGG CCATTCTTTC TGTTGTGAAC
TCATTGATTG ATAGCAAGGA AATTAATTTG TAGATTTGAT TTTGATAATT AAAAGTTAGT
TAAACAATAA AAGTACGATA GAGG
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| Protein sequence | MLKDPSTKYA AFKGVKLDKR TWPSKSITKA PRWLSTDLRD GNQALPDPMS VEEKKEYFHK
LLEIGFKEIE VSFPSASQTD FDFTRYAVEN APDDVSIQVL TQSREPLIRR TVESVKGAKK
ATIHTYLATS DVFRDVVFNM SQEDAIAKAI ETTKLVKSLT KDDPEMQETE WTLEFSPECF
SDTPTEFAVQ ICEAVKNVWE PTVENPIIFN LPATVEVASP NVYADQIEYF ATHISEREKV
CISLHAHNDR GCGVAASELG LLAGGDRVEG CLFGNGERTG NVDLITVALN MYTNGVAPEL
DFSEIEKLIE VSERCNKIPV HPRAPYSGSL VVCAFSGSHQ DAIKKGFSKA EARAARGDTK
WAIPYLPLDP KDIGRNYEAV IRVNSQSGKG GAAWVILRSL GLDLPRHLQV VFSGIVQERA
DSLGRELKSE EIAALFNEQY CSTSNLSVKD FEITKRKNAP ENKDREIFAV LQAGSKTVDV
SGQGNGPISA FVDAISKKYG VSFEVVNYSE HSLGSGTQSK AATYIELAYN NSNNEHVTKW
GCGINTDVSQ ASMEAILSVV NSLIDSKEIN L
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